Variant report

Variant	rs4699763
Chromosome Location	chr4:100738894-100738895
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:100485148..100487475-chr4:100738196..100740043,2	K562	blood:
2	chr4:100735043..100738034-chr4:100738478..100743711,4	K562	blood:
3	chr4:100737221..100739559-chr4:100813734..100816080,3	MCF-7	breast:
4	chr4:100737053..100739337-chr4:100869822..100871487,2	K562	blood:
5	chr4:100737796..100739417-chr4:100869938..100872690,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000070190	Chromatin interaction
ENSG00000245322	Chromatin interaction
ENSG00000138823	Chromatin interaction
ENSG00000145331	Chromatin interaction
ENSG00000164032	Chromatin interaction
ENSG00000109270	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs17539386	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17539393	0.92[CEU][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17540668	0.90[AMR][1000 genomes]
rs17611664	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17611961	1.00[AMR][1000 genomes]
rs2228694	0.92[CEU][hapmap];0.82[EUR][1000 genomes]
rs4699387	1.00[AMR][1000 genomes]
rs4699388	1.00[AMR][1000 genomes]
rs4699766	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4699767	0.83[CEU][hapmap];1.00[AMR][1000 genomes]
rs4699768	1.00[AMR][1000 genomes]
rs59432761	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4699763	DAPP1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100723200-100741000	Weak transcription	Right Atrium	heart
2	chr4:100736400-100740600	Enhancers	K562	blood
3	chr4:100736600-100740000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
4	chr4:100737000-100742000	Weak transcription	Pancreas	Pancrea
5	chr4:100737400-100739200	Flanking Active TSS	Primary T cells from cord blood	blood
6	chr4:100737400-100739200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
7	chr4:100737400-100739400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
8	chr4:100737400-100739400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr4:100737400-100740200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
10	chr4:100737400-100741200	Weak transcription	Spleen	Spleen
11	chr4:100737600-100739000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
12	chr4:100737600-100739000	Active TSS	Thymus	Thymus
13	chr4:100737600-100739200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
14	chr4:100737600-100739800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
15	chr4:100737600-100739800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr4:100737600-100740000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr4:100737800-100739200	Active TSS	Primary B cells from peripheral blood	blood
18	chr4:100737800-100739200	Active TSS	Adipose Nuclei	Adipose
19	chr4:100737800-100739200	Active TSS	Duodenum Mucosa	Duodenum
20	chr4:100737800-100739400	Active TSS	NHEK	skin
21	chr4:100737800-100739600	Active TSS	Esophagus	oesophagus
22	chr4:100737800-100740000	Active TSS	Rectal Mucosa Donor 29	rectum
23	chr4:100737800-100741000	Active TSS	GM12878-XiMat	blood
24	chr4:100738000-100739000	Active TSS	Liver	Liver
25	chr4:100738000-100739000	Active TSS	Brain Hippocampus Middle	brain
26	chr4:100738000-100739000	Active TSS	Colonic Mucosa	Colon
27	chr4:100738000-100739600	Active TSS	Rectal Smooth Muscle	rectum
28	chr4:100738200-100739000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr4:100738200-100739000	Active TSS	Sigmoid Colon	Sigmoid Colon
30	chr4:100738400-100739000	Active TSS	Placenta	Placenta
31	chr4:100738400-100739000	Active TSS	Fetal Thymus	thymus
32	chr4:100738400-100739400	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
33	chr4:100738400-100740000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
34	chr4:100738400-100740000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
35	chr4:100738400-100740000	Flanking Active TSS	HMEC	breast
36	chr4:100738600-100739000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
37	chr4:100738600-100739000	Flanking Active TSS	Placenta Amnion	Placenta Amnion
38	chr4:100738600-100739200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
39	chr4:100738600-100739400	Enhancers	Stomach Mucosa	stomach
40	chr4:100738800-100739000	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr4:100738800-100739000	Active TSS	Primary B cells from cord blood	blood
42	chr4:100738800-100739000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr4:100738800-100739000	Enhancers	Rectal Mucosa Donor 31	rectum
44	chr4:100738800-100739000	Enhancers	Small Intestine	intestine
45	chr4:100738800-100739200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
46	chr4:100738800-100739200	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
47	chr4:100738800-100740000	Flanking Active TSS	Primary hematopoietic stem cells	blood
48	chr4:100738800-100740400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
49	chr4:100738800-100741400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
50	chr4:100738800-100744400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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