Variant report

Variant	rs4703707
Chromosome Location	chr5:75766001-75766002
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10038589	0.95[CEU][hapmap];0.92[YRI][hapmap];0.98[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs10045155	0.94[CEU][hapmap];0.91[CHB][hapmap];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10050545	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10474477	0.82[EUR][1000 genomes]
rs12518249	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs28662810	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4326119	0.84[CEU][hapmap]
rs6859984	0.88[CEU][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs6877133	0.90[CEU][hapmap];0.82[EUR][1000 genomes]
rs9763690	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:75722800-75767800	Weak transcription	Ovary	ovary
2	chr5:75745000-75767800	Weak transcription	Fetal Thymus	thymus
3	chr5:75747200-75771600	Weak transcription	Fetal Stomach	stomach
4	chr5:75747400-75767800	Weak transcription	Spleen	Spleen
5	chr5:75747800-75767800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr5:75754200-75772000	Weak transcription	Fetal Kidney	kidney
7	chr5:75754400-75768000	Weak transcription	Fetal Lung	lung
8	chr5:75755000-75766600	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr5:75757800-75767800	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr5:75758000-75767200	Weak transcription	Small Intestine	intestine
11	chr5:75758000-75767800	Weak transcription	Gastric	stomach
12	chr5:75758000-75767800	Weak transcription	Lung	lung
13	chr5:75758000-75769400	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr5:75758200-75767800	Weak transcription	Pancreas	Pancrea
15	chr5:75758200-75775000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr5:75758400-75769200	Weak transcription	Primary B cells from cord blood	blood
17	chr5:75759200-75771400	Weak transcription	Fetal Intestine Small	intestine
18	chr5:75759400-75766200	Weak transcription	Stomach Mucosa	stomach
19	chr5:75759400-75767800	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr5:75760000-75767200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr5:75762800-75772600	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr5:75764000-75766400	Enhancers	Primary monocytes fromperipheralblood	blood
23	chr5:75764400-75767800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr5:75764400-75768000	Weak transcription	Primary hematopoietic stem cells	blood
25	chr5:75764400-75768600	Enhancers	Primary T killer memory cells from peripheral blood	blood
26	chr5:75764400-75772800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
27	chr5:75764600-75766200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr5:75765200-75766800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr5:75765200-75767000	Weak transcription	Duodenum Mucosa	Duodenum
30	chr5:75765200-75767800	Enhancers	Liver	Liver
31	chr5:75765400-75766600	Enhancers	Primary T cells fromperipheralblood	blood
32	chr5:75765400-75766600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
33	chr5:75765400-75772600	Enhancers	Primary T helper naive cells from peripheral blood	blood
34	chr5:75765600-75766200	Enhancers	Monocytes-CD14+_RO01746	blood
35	chr5:75765600-75766400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
36	chr5:75765600-75769000	Weak transcription	Primary neutrophils fromperipheralblood	blood
37	chr5:75765600-75773600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
38	chr5:75765800-75766200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
39	chr5:75765800-75766200	Genic enhancers	Primary T helper 17 cells PMA-I stimulated	--
40	chr5:75765800-75766200	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
41	chr5:75765800-75766400	Strong transcription	Primary T cells from cord blood	blood
42	chr5:75765800-75769400	Enhancers	Rectal Mucosa Donor 31	rectum
43	chr5:75765800-75772000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
44	chr5:75765800-75773000	Enhancers	Primary T helper cells fromperipheralblood	blood
45	chr5:75766000-75767800	Weak transcription	Placenta	Placenta
46	chr5:75766000-75768000	Enhancers	HepG2	liver
47	chr5:75766000-75769200	Weak transcription	GM12878-XiMat	blood
48	chr5:75766000-75771200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
49	chr5:75766000-75772200	Enhancers	Primary T killer naive cells fromperipheralblood	blood

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