The 2.0 version of rSNPBase

Variant report

Variant rs4704630
Chromosome Location chr5:79492333-79492334
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79480200-79492400 Enhancers iPS-15b Cell Line embryonic stem cell
2 chr5:79483800-79496800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr5:79483800-79498200 Weak transcription NHEK skin
4 chr5:79488000-79492400 Enhancers Brain Substantia Nigra brain
5 chr5:79488200-79497200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr5:79488400-79492600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr5:79488600-79493200 Enhancers Brain Hippocampus Middle brain
8 chr5:79488600-79497000 Weak transcription Colonic Mucosa Colon
9 chr5:79489000-79496000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr5:79489000-79496400 Weak transcription Placenta Amnion Placenta Amnion
11 chr5:79489000-79497000 Weak transcription Primary B cells from peripheral blood blood
12 chr5:79489000-79500800 Weak transcription Muscle Satellite Cultured Cells --
13 chr5:79489200-79494000 Enhancers Brain Cingulate Gyrus brain
14 chr5:79489200-79495600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr5:79489200-79500800 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr5:79489400-79493000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr5:79489400-79498200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:79489600-79492600 Enhancers Brain Anterior Caudate brain
19 chr5:79489600-79495200 Enhancers Fetal Heart heart
20 chr5:79489600-79497000 Weak transcription Gastric stomach
21 chr5:79489600-79498200 Weak transcription Aorta Aorta
22 chr5:79489600-79499600 Weak transcription NH-A brain
23 chr5:79489600-79500400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr5:79489800-79498000 Weak transcription HMEC breast
25 chr5:79489800-79500000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:79489800-79500800 Weak transcription HSMM muscle
27 chr5:79489800-79502000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr5:79490000-79494200 Weak transcription HepG2 liver
29 chr5:79490200-79494000 Weak transcription Fetal Intestine Large intestine
30 chr5:79490200-79495200 Weak transcription Duodenum Mucosa Duodenum
31 chr5:79490200-79498400 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr5:79490200-79499600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr5:79490400-79498800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:79490600-79493400 Genic enhancers Dnd41 blood
35 chr5:79490600-79494400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr5:79490600-79494600 Weak transcription Stomach Mucosa stomach
37 chr5:79490600-79496400 Weak transcription Fetal Brain Female brain
38 chr5:79490800-79492600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr5:79490800-79493200 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr5:79490800-79493400 Weak transcription Lung lung
41 chr5:79490800-79494000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr5:79490800-79494200 Weak transcription Esophagus oesophagus
43 chr5:79490800-79494200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr5:79490800-79494400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr5:79490800-79494400 Weak transcription Primary monocytes fromperipheralblood blood
46 chr5:79490800-79494400 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr5:79490800-79494600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr5:79490800-79494600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr5:79490800-79498200 Weak transcription Primary B cells from cord blood blood
50 chr5:79490800-79498200 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015