The 2.0 version of rSNPBase
Home
Search
Document
What's New
Tutorial
Data Content
Download
Feedback
About Us
Variant report
Variant
rs4722048
Chromosome Location
chr7:21730108-21730109
allele
C/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:21295642..21296533-chr7:21730063..21731012,2
MCF-7
breast:
No data
No data
No data
No data
Extended variants information (count: 6 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:3)
rs_ID
r
2
[population]
rs12154628
1.00[JPT][hapmap]
rs6949101
1.00[JPT][hapmap]
rs6963989
1.00[JPT][hapmap]
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv932861
chr7:21726963-21730191
Weak transcription
Chromatin interactive region
n/a
inside rSNPs
diseases
2
nsv933338
chr7:21727146-21730347
Weak transcription
Chromatin interactive region
n/a
inside rSNPs
diseases
3
nsv5655
chr7:21728469-21773203
Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer
TF binding regionCpG islandChromatin interactive region
1 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links