Variant report

Variant	rs4730285
Chromosome Location	chr7:78047402-78047403
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11761763	1.00[AFR][1000 genomes]
rs12234242	1.00[AFR][1000 genomes]
rs6466209	0.88[EUR][1000 genomes]
rs73148310	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022764	chr7:77911072-78316607	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:78045000-78052400	Enhancers	Brain Anterior Caudate	brain
2	chr7:78045800-78048600	Weak transcription	Ovary	ovary
3	chr7:78046200-78047600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr7:78046400-78049200	Weak transcription	Left Ventricle	heart
5	chr7:78047000-78051000	Enhancers	Brain Substantia Nigra	brain
6	chr7:78047000-78051600	Enhancers	Brain Cingulate Gyrus	brain
7	chr7:78047200-78047600	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr7:78047200-78048400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
9	chr7:78047200-78051600	Enhancers	Brain Angular Gyrus	brain
10	chr7:78047200-78051600	Enhancers	Brain Inferior Temporal Lobe	brain
11	chr7:78047200-78052000	Enhancers	Brain Hippocampus Middle	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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