Variant report

Variant	rs4743068
Chromosome Location	chr9:100021407-100021408
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:33496241..33497773-chr9:100020553..100022401,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7859665	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv972791	chr9:100007482-100037888	Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100001200-100039400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr9:100001600-100022200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr9:100001600-100037400	Weak transcription	Primary T cells from cord blood	blood
4	chr9:100002000-100023000	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr9:100002000-100025400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr9:100002000-100037400	Weak transcription	Fetal Muscle Trunk	muscle
7	chr9:100002000-100037800	Weak transcription	Stomach Smooth Muscle	stomach
8	chr9:100002000-100038600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr9:100002000-100038600	Weak transcription	Fetal Intestine Large	intestine
10	chr9:100002000-100038600	Weak transcription	Fetal Intestine Small	intestine
11	chr9:100002000-100038800	Weak transcription	Primary B cells from peripheral blood	blood
12	chr9:100002000-100038800	Weak transcription	Ovary	ovary
13	chr9:100002000-100038800	Weak transcription	Right Ventricle	heart
14	chr9:100002000-100039000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr9:100002000-100039600	Weak transcription	Primary hematopoietic stem cells	blood
16	chr9:100002000-100039600	Weak transcription	Adipose Nuclei	Adipose
17	chr9:100002000-100039600	Weak transcription	Colon Smooth Muscle	Colon
18	chr9:100002000-100039600	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr9:100002000-100040400	Weak transcription	Spleen	Spleen
20	chr9:100002200-100038800	Weak transcription	Liver	Liver
21	chr9:100002200-100039400	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr9:100002200-100039400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr9:100002400-100037400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
24	chr9:100010600-100039400	Weak transcription	Brain Hippocampus Middle	brain
25	chr9:100011600-100022400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr9:100011600-100038800	Weak transcription	Fetal Stomach	stomach
27	chr9:100011600-100039600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
28	chr9:100013000-100040400	Weak transcription	Brain Substantia Nigra	brain
29	chr9:100021400-100025400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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