Variant report

Variant	rs474523
Chromosome Location	chr12:117765810-117765811
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1520810	1.00[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1879419	0.86[CEU][hapmap]
rs4482113	0.87[ASN][1000 genomes]
rs471871	0.93[CEU][hapmap];0.80[CHB][hapmap];0.95[EUR][1000 genomes]
rs473640	1.00[CEU][hapmap];0.89[CHB][hapmap];0.82[JPT][hapmap];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs478027	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs482555	0.80[CHB][hapmap]
rs492596	0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs496505	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs499262	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs527590	0.80[CHB][hapmap]
rs528558	1.00[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs545343	0.84[EUR][1000 genomes]
rs547954	0.87[CEU][hapmap]
rs551340	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs571895	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs579604	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs816296	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9658282	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117728000-117771200	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr12:117739800-117771400	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr12:117749400-117770800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:117762200-117771200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr12:117763400-117766000	Weak transcription	NHEK	skin
6	chr12:117765000-117773000	Weak transcription	Pancreas	Pancrea
7	chr12:117765600-117767200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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