Variant report

Variant	rs474837
Chromosome Location	chr2:141354997-141354998
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs491391	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs492190	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs494227	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs503742	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs524037	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs538467	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs540307	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875193	chr2:141334737-141361688	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region miRNA	n/a	inside rSNPs	n/a
2	nsv528276	chr2:141354396-141362222	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:141351800-141359000	Weak transcription	Pancreas	Pancrea
2	chr2:141354200-141357800	Weak transcription	A549	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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