The 2.0 version of rSNPBase

Variant report

Variant rs4752966
Chromosome Location chr11:47160309-47160310
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47131800-47161200 Weak transcription Brain Cingulate Gyrus brain
2 chr11:47141000-47164600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr11:47143600-47164600 Weak transcription Placenta Amnion Placenta Amnion
4 chr11:47143600-47175200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr11:47145200-47164800 Weak transcription Ovary ovary
6 chr11:47145200-47174800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr11:47147600-47164200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr11:47148200-47164400 Weak transcription NHEK skin
9 chr11:47149000-47170400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr11:47149400-47173200 Weak transcription Primary B cells from peripheral blood blood
11 chr11:47149600-47170400 Weak transcription Esophagus oesophagus
12 chr11:47149800-47164200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr11:47151200-47170600 Weak transcription Gastric stomach
14 chr11:47152600-47161400 Weak transcription Brain Angular Gyrus brain
15 chr11:47152800-47164600 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr11:47153000-47164400 Weak transcription H1 Cell Line embryonic stem cell
17 chr11:47153000-47164400 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr11:47153000-47164400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr11:47153000-47164400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr11:47153000-47174400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr11:47153400-47174800 Weak transcription Primary hematopoietic stem cells blood
22 chr11:47154800-47160800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr11:47155400-47164000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr11:47155400-47164600 Weak transcription Pancreas Pancrea
25 chr11:47155400-47170200 Weak transcription Stomach Mucosa stomach
26 chr11:47155600-47170200 Weak transcription Small Intestine intestine
27 chr11:47155600-47174400 Weak transcription Fetal Brain Male brain
28 chr11:47157200-47164200 Weak transcription Placenta Placenta
29 chr11:47157200-47164400 Weak transcription Rectal Smooth Muscle rectum
30 chr11:47157400-47164000 Weak transcription Fetal Kidney kidney
31 chr11:47157600-47161400 Weak transcription Brain Substantia Nigra brain
32 chr11:47157600-47164400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr11:47157600-47170400 Weak transcription Colonic Mucosa Colon
34 chr11:47157800-47162400 Strong transcription Fetal Intestine Small intestine
35 chr11:47157800-47169800 Weak transcription Brain Germinal Matrix brain
36 chr11:47158000-47160400 Strong transcription Aorta Aorta
37 chr11:47158000-47164400 Weak transcription Muscle Satellite Cultured Cells --
38 chr11:47158000-47174800 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr11:47158400-47161600 Strong transcription Stomach Smooth Muscle stomach
40 chr11:47158600-47160400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr11:47158600-47160800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr11:47158600-47161600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr11:47158600-47161600 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr11:47158600-47161600 Strong transcription Spleen Spleen
45 chr11:47158600-47161800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr11:47158600-47161800 Strong transcription Fetal Lung lung
47 chr11:47158600-47164000 Weak transcription HSMMtube muscle
48 chr11:47158800-47165200 Weak transcription Osteobl bone
49 chr11:47158800-47175000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr11:47159000-47160400 Strong transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015