Variant report

Variant rs475325
Chromosome Location chr11:67785062-67785063
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67771600-67797600 Weak transcription Small Intestine intestine
2 chr11:67772600-67792400 Weak transcription H9 Cell Line embryonic stem cell
3 chr11:67778400-67787400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr11:67778600-67788000 Weak transcription H1 Cell Line embryonic stem cell
5 chr11:67779800-67785600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr11:67781400-67786800 Enhancers Esophagus oesophagus
7 chr11:67782400-67785200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr11:67782400-67785400 Flanking Active TSS Hela-S3 cervix
9 chr11:67782400-67788200 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr11:67782400-67791400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr11:67782400-67794800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr11:67782400-67794800 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr11:67782400-67796800 Weak transcription Colon Smooth Muscle Colon
14 chr11:67782600-67789000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr11:67782600-67791400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr11:67782600-67791600 Weak transcription Ovary ovary
17 chr11:67782600-67791600 Weak transcription Stomach Smooth Muscle stomach
18 chr11:67782600-67792200 Weak transcription HSMMtube muscle
19 chr11:67782600-67792600 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr11:67782600-67794000 Weak transcription NH-A brain
21 chr11:67782600-67797000 Weak transcription Rectal Smooth Muscle rectum
22 chr11:67782800-67795800 Strong transcription Primary monocytes fromperipheralblood blood
23 chr11:67782800-67797200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr11:67783400-67786000 Enhancers Adipose Nuclei Adipose
25 chr11:67783600-67786200 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
26 chr11:67783800-67785200 Flanking Active TSS A549 lung
27 chr11:67783800-67785400 Enhancers Placenta Placenta
28 chr11:67783800-67785400 Flanking Active TSS HepG2 liver
29 chr11:67783800-67785400 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr11:67783800-67785600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:67783800-67786000 Enhancers Fetal Muscle Trunk muscle
32 chr11:67783800-67788000 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr11:67784000-67785200 Enhancers Fetal Muscle Leg muscle
34 chr11:67784000-67785200 Enhancers HMEC breast
35 chr11:67784000-67785800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr11:67784000-67785800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr11:67784000-67785800 Enhancers Pancreas Pancrea
38 chr11:67784000-67786000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr11:67784000-67786000 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr11:67784000-67786200 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr11:67784000-67789200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr11:67784200-67785200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr11:67784200-67785200 Enhancers Cortex derived primary cultured neurospheres brain
44 chr11:67784200-67785600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr11:67784200-67785600 Enhancers Brain Substantia Nigra brain
46 chr11:67784200-67785800 Enhancers Brain Hippocampus Middle brain
47 chr11:67784200-67785800 Enhancers Colonic Mucosa Colon
48 chr11:67784200-67786000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr11:67784200-67786000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr11:67784200-67786000 Enhancers Gastric stomach

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