Variant report

Variant	rs4755954
Chromosome Location	chr11:45152263-45152264
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10838421	0.81[ASN][1000 genomes]
rs10838422	0.88[ASN][1000 genomes]
rs12419529	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2021225	1.00[CEU][hapmap]
rs2863154	1.00[JPT][hapmap]
rs2902425	0.82[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3740787	0.92[CHD][hapmap]
rs58195346	0.88[ASN][1000 genomes]
rs6485591	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6485593	0.82[CHB][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7129476	0.96[EUR][1000 genomes]
rs7131444	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs737451	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7482212	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs754840	0.99[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs963698	1.00[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825852	chr11:45141386-45228580	Bivalent/Poised TSS Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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