Variant report

Variant	rs4763192
Chromosome Location	chr12:63106708-63106709
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:63097728..63100146-chr12:63104494..63106839,2	MCF-7	breast:
2	chr12:63106698..63109558-chr12:63117720..63119992,2	MCF-7	breast:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1015749	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs10506445	1.00[ASW][hapmap]
rs11174607	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs11174611	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.90[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3951389	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs432794	1.00[ASW][hapmap]
rs4763028	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4763191	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4763196	1.00[ASW][hapmap]
rs60572296	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63067400-63116800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr12:63078000-63118600	Weak transcription	Duodenum Mucosa	Duodenum
3	chr12:63087200-63113600	Weak transcription	Liver	Liver
4	chr12:63096600-63157000	Weak transcription	Pancreas	Pancrea
5	chr12:63097000-63118800	Weak transcription	Stomach Mucosa	stomach
6	chr12:63097600-63109400	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr12:63097600-63109400	Weak transcription	Fetal Intestine Large	intestine
8	chr12:63097800-63108400	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr12:63097800-63111600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr12:63097800-63114400	Weak transcription	Aorta	Aorta
11	chr12:63098000-63107000	Weak transcription	Brain Anterior Caudate	brain
12	chr12:63098200-63107800	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr12:63098200-63108400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr12:63098600-63108200	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr12:63098600-63115600	Strong transcription	HepG2	liver
16	chr12:63099000-63108200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr12:63099400-63108600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr12:63100200-63108200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
19	chr12:63102200-63106800	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr12:63102400-63107200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr12:63102800-63107000	Weak transcription	Brain Angular Gyrus	brain
22	chr12:63102800-63108200	Enhancers	A549	lung
23	chr12:63103000-63108400	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr12:63103000-63108400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr12:63103000-63112800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr12:63103200-63107600	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr12:63103200-63108400	Weak transcription	Right Atrium	heart
28	chr12:63103200-63112800	Weak transcription	Primary hematopoietic stem cells	blood
29	chr12:63103200-63114400	Weak transcription	Right Ventricle	heart
30	chr12:63103400-63108000	Weak transcription	Osteobl	bone
31	chr12:63103400-63108200	Weak transcription	HUES64 Cell Line	embryonic stem cell
32	chr12:63103400-63108200	Weak transcription	HSMM	muscle
33	chr12:63103400-63108400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
34	chr12:63103400-63108400	Weak transcription	NHLF	lung
35	chr12:63103400-63108600	Weak transcription	Gastric	stomach
36	chr12:63103400-63108800	Weak transcription	Left Ventricle	heart
37	chr12:63103400-63118800	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr12:63103800-63112400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr12:63104000-63112000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr12:63104200-63107600	Strong transcription	Fetal Intestine Small	intestine
41	chr12:63104200-63109600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr12:63104400-63106800	Weak transcription	Placenta	Placenta
43	chr12:63104400-63108800	Enhancers	Fetal Thymus	thymus
44	chr12:63104400-63118800	Weak transcription	Primary monocytes fromperipheralblood	blood
45	chr12:63104600-63108400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr12:63104600-63109800	Enhancers	Fetal Stomach	stomach
47	chr12:63104800-63107200	Enhancers	Brain Germinal Matrix	brain
48	chr12:63104800-63112000	Enhancers	Cortex derived primary cultured neurospheres	brain
49	chr12:63105000-63106800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr12:63105000-63110000	Enhancers	Fetal Muscle Leg	muscle

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