Variant report

Variant	rs4767734
Chromosome Location	chr12:119325193-119325194
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1406451	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1406452	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2178281	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2253853	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2463875	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698055	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698058	0.80[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs2698060	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698061	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698070	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698071	0.86[EUR][1000 genomes]
rs2698072	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698073	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698075	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2698077	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730432	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730434	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730436	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730438	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2730439	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2730440	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2730441	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35860164	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4123	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4303287	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4766920	0.83[ASN][1000 genomes]
rs4767733	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv930978	chr12:118866332-119450600	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	esv3360267	chr12:119324669-119326567	Enhancers Weak transcription	TF binding region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119321200-119327600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr12:119325000-119325400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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