Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10774512	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10849687	0.82[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs11064867	0.81[ASN][1000 genomes]
rs11064868	0.86[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs11064874	0.80[ASN][1000 genomes]
rs1123790	0.96[EUR][1000 genomes]
rs12309592	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1966324	0.88[ASN][1000 genomes]
rs1970985	0.82[EUR][1000 genomes]
rs1985793	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2188711	0.96[EUR][1000 genomes]
rs2301655	0.96[EUR][1000 genomes]
rs2393549	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2393550	0.87[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs278124	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2893806	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4767836	0.89[EUR][1000 genomes]
rs4767837	0.82[ASN][1000 genomes]
rs6490262	0.82[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs6490263	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6490264	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6490265	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7953776	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7969977	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052595	chr12:119992580-120132038	Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv541616	chr12:119992580-120132038	Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120083600-120094400	Weak transcription	HSMM	muscle

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