Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:46085906..46087446-chr12:46110360..46112448,2	K562	blood:
2	chr12:46085115..46087445-chr12:46112760..46114475,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11183170	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11183175	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11183184	0.81[CEU][hapmap];0.81[CHB][hapmap];1.00[YRI][hapmap]
rs11183201	1.00[YRI][hapmap]
rs12314770	0.88[YRI][hapmap]
rs12582799	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1558982	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1558983	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1863127	1.00[YRI][hapmap]
rs2193749	1.00[YRI][hapmap]
rs2216470	0.96[CEU][hapmap];0.85[CHB][hapmap];0.95[JPT][hapmap];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2216471	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs247930	1.00[YRI][hapmap]
rs35115	1.00[YRI][hapmap]
rs35117	1.00[YRI][hapmap]
rs35125	1.00[YRI][hapmap]
rs6582574	1.00[YRI][hapmap]
rs7138997	0.80[JPT][hapmap];1.00[YRI][hapmap]
rs7958600	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7979218	0.85[YRI][hapmap]
rs7979398	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs978689	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899052	chr12:46068394-46175469	Active TSS Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	51 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:46082400-46086600	Weak transcription	Psoas Muscle	Psoas
2	chr12:46083800-46090400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr12:46083800-46090800	Weak transcription	Right Ventricle	heart
4	chr12:46084200-46088000	Weak transcription	Left Ventricle	heart

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