| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1049525 |
chr12:46721742-47264172 |
Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
152 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv541486 |
chr12:46721742-47264172 |
Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
152 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv3416674 |
chr12:46988689-47178369 |
Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv1845143 |
chr12:47051076-47431496 |
Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3374922 |
chr12:47144185-47145733 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 6 |
nsv53611 |
chr12:47145000-47145047 |
Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
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Last update: Aug 31, 2015