The 2.0 version of rSNPBase

Variant report

Variant rs4773923
Chromosome Location chr13:96362266-96362267
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96337600-96364200 Weak transcription Ovary ovary
2 chr13:96347000-96377600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr13:96349800-96363000 Weak transcription Fetal Lung lung
4 chr13:96350800-96363800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr13:96350800-96365400 Weak transcription HSMMtube muscle
6 chr13:96351000-96362400 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr13:96351000-96362600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr13:96351000-96362600 Weak transcription Adipose Nuclei Adipose
9 chr13:96351000-96363600 Weak transcription Colonic Mucosa Colon
10 chr13:96351000-96365800 Weak transcription Brain Anterior Caudate brain
11 chr13:96351000-96365800 Weak transcription Fetal Brain Male brain
12 chr13:96351000-96368600 Weak transcription Lung lung
13 chr13:96354200-96364600 Weak transcription Brain Angular Gyrus brain
14 chr13:96355000-96364800 Weak transcription Esophagus oesophagus
15 chr13:96355600-96364000 Weak transcription HepG2 liver
16 chr13:96355800-96362400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr13:96355800-96364000 Weak transcription Stomach Smooth Muscle stomach
18 chr13:96356000-96365200 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr13:96356000-96372400 Weak transcription Rectal Smooth Muscle rectum
20 chr13:96356200-96363200 Weak transcription HMEC breast
21 chr13:96356400-96363800 Weak transcription Fetal Kidney kidney
22 chr13:96356600-96363000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr13:96356600-96393600 Weak transcription Right Ventricle heart
24 chr13:96356800-96366000 Weak transcription Hela-S3 cervix
25 chr13:96358600-96363400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
26 chr13:96358800-96362600 Weak transcription Fetal Stomach stomach
27 chr13:96358800-96365600 Weak transcription Brain Hippocampus Middle brain
28 chr13:96359000-96364200 Weak transcription Psoas Muscle Psoas
29 chr13:96359400-96363200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr13:96359400-96386200 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr13:96359800-96368000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr13:96359800-96379200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr13:96360000-96362400 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr13:96360000-96363200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr13:96360000-96364600 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr13:96360000-96364800 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr13:96360200-96362800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr13:96360200-96363800 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr13:96360200-96364200 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr13:96360200-96365600 Weak transcription Brain Inferior Temporal Lobe brain
41 chr13:96360400-96362400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr13:96360400-96365400 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr13:96360400-96369400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr13:96360600-96364600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr13:96360600-96364600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr13:96360600-96367200 Weak transcription Gastric stomach
47 chr13:96360600-96379200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr13:96360600-96383000 Weak transcription K562 blood
49 chr13:96360600-96384000 Weak transcription Small Intestine intestine
50 chr13:96360800-96363000 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015