Variant report

Variant rs4796960
Chromosome Location chr18:12318027-12318028
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12310000-12318200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr18:12310000-12324800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr18:12310000-12325800 Weak transcription Fetal Kidney kidney
4 chr18:12310200-12319000 Strong transcription HUES48 Cell Line embryonic stem cell
5 chr18:12310200-12320400 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr18:12310200-12324800 Weak transcription HepG2 liver
7 chr18:12310600-12322800 Strong transcription Placenta Amnion Placenta Amnion
8 chr18:12311000-12323200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr18:12311000-12324800 Weak transcription Spleen Spleen
10 chr18:12311600-12318400 Genic enhancers Muscle Satellite Cultured Cells --
11 chr18:12312600-12319000 Strong transcription HUES64 Cell Line embryonic stem cell
12 chr18:12312600-12320400 Weak transcription Brain Angular Gyrus brain
13 chr18:12312600-12325000 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr18:12312600-12332600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr18:12312800-12324800 Weak transcription Colonic Mucosa Colon
16 chr18:12312800-12324800 Weak transcription Fetal Brain Female brain
17 chr18:12313000-12319000 Enhancers Fetal Heart heart
18 chr18:12313000-12319000 Strong transcription A549 lung
19 chr18:12313000-12320800 Weak transcription Fetal Intestine Small intestine
20 chr18:12313200-12318600 Genic enhancers NHDF-Ad bronchial
21 chr18:12313200-12320400 Weak transcription Liver Liver
22 chr18:12313400-12318200 Genic enhancers Osteobl bone
23 chr18:12313400-12319600 Genic enhancers Fetal Muscle Leg muscle
24 chr18:12314000-12333600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr18:12314200-12319000 Enhancers Rectal Smooth Muscle rectum
26 chr18:12314200-12323000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr18:12314200-12327800 Strong transcription HUES6 Cell Line embryonic stem cell
28 chr18:12314400-12342600 Weak transcription Small Intestine intestine
29 chr18:12314600-12324400 Weak transcription Brain Germinal Matrix brain
30 chr18:12314800-12320600 Weak transcription Fetal Intestine Large intestine
31 chr18:12315200-12319200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr18:12315400-12318800 Genic enhancers Fetal Muscle Trunk muscle
33 chr18:12315400-12318800 Genic enhancers Fetal Stomach stomach
34 chr18:12315600-12324800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr18:12316000-12318600 Enhancers GM12878-XiMat blood
36 chr18:12316000-12318800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr18:12316000-12318800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr18:12316200-12318200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr18:12316200-12318600 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr18:12316200-12318600 Genic enhancers NHLF lung
41 chr18:12316200-12319800 Enhancers Primary B cells from peripheral blood blood
42 chr18:12316200-12320600 Weak transcription Brain Substantia Nigra brain
43 chr18:12316200-12324600 Weak transcription Gastric stomach
44 chr18:12316200-12325000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr18:12316400-12318200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr18:12316400-12318200 Weak transcription Brain Cingulate Gyrus brain
47 chr18:12316400-12318200 Enhancers Colon Smooth Muscle Colon
48 chr18:12316400-12318600 Strong transcription K562 blood
49 chr18:12316400-12320600 Weak transcription Brain Anterior Caudate brain
50 chr18:12316400-12323000 Weak transcription Fetal Lung lung

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