The 2.0 version of rSNPBase

Variant report

Variant rs4798783
Chromosome Location chr18:9174885-9174886
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:9148400-9187200 Weak transcription Muscle Satellite Cultured Cells --
2 chr18:9153600-9182400 Weak transcription Liver Liver
3 chr18:9153600-9185000 Weak transcription Rectal Smooth Muscle rectum
4 chr18:9157400-9182400 Weak transcription HepG2 liver
5 chr18:9162200-9187800 Weak transcription Thymus Thymus
6 chr18:9164400-9200600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr18:9165600-9183000 Weak transcription Primary T cells from cord blood blood
8 chr18:9165600-9195400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr18:9168400-9185600 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr18:9170200-9181400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr18:9170400-9175400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr18:9171400-9175000 Enhancers Primary B cells from peripheral blood blood
13 chr18:9171400-9175400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
14 chr18:9171400-9175600 Enhancers Primary T helper cells PMA-I stimulated --
15 chr18:9171400-9176600 Enhancers Primary T cells fromperipheralblood blood
16 chr18:9171600-9175000 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr18:9171600-9177800 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr18:9171600-9180800 Weak transcription NHDF-Ad bronchial
19 chr18:9171800-9175200 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr18:9171800-9177200 Weak transcription HUVEC blood vessel
21 chr18:9172000-9182200 Weak transcription Fetal Lung lung
22 chr18:9172000-9216200 Weak transcription Fetal Brain Female brain
23 chr18:9172200-9185000 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr18:9172400-9187000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr18:9172600-9175400 Enhancers Primary monocytes fromperipheralblood blood
26 chr18:9172600-9182200 Weak transcription Dnd41 blood
27 chr18:9173000-9208400 Weak transcription NHLF lung
28 chr18:9173200-9182000 Weak transcription Fetal Intestine Large intestine
29 chr18:9173600-9175200 Enhancers Psoas Muscle Psoas
30 chr18:9173600-9176800 Enhancers Left Ventricle heart
31 chr18:9173800-9175000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr18:9174000-9175200 Enhancers Primary hematopoietic stem cells blood
33 chr18:9174000-9175200 Strong transcription Fetal Intestine Small intestine
34 chr18:9174000-9175400 ZNF genes & repeats GM12878-XiMat blood
35 chr18:9174000-9178400 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr18:9174000-9182800 Weak transcription Osteobl bone
37 chr18:9174200-9175200 Enhancers Brain Hippocampus Middle brain
38 chr18:9174200-9191800 Weak transcription Fetal Stomach stomach
39 chr18:9174200-9192000 Weak transcription HMEC breast
40 chr18:9174400-9175200 Genic enhancers Primary T helper naive cells fromperipheralblood blood
41 chr18:9174400-9175200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
42 chr18:9174400-9176200 Weak transcription Small Intestine intestine
43 chr18:9174400-9177000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr18:9174400-9179200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr18:9174400-9180000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr18:9174400-9180800 Weak transcription K562 blood
47 chr18:9174400-9181000 Weak transcription NHEK skin
48 chr18:9174400-9182800 Weak transcription HSMM muscle
49 chr18:9174400-9183800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr18:9174400-9184000 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015