Variant report

Variant rs4803078
Chromosome Location chr19:53749581-53749582
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53733600-53755200 ZNF genes & repeats Adipose Nuclei Adipose
2 chr19:53733600-53755800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
3 chr19:53735800-53756200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr19:53737400-53757600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr19:53738800-53756600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
6 chr19:53739400-53755200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr19:53739600-53756200 ZNF genes & repeats Fetal Brain Female brain
8 chr19:53740000-53749800 ZNF genes & repeats Duodenum Mucosa Duodenum
9 chr19:53740000-53750600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
10 chr19:53740000-53756400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
11 chr19:53740000-53756600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
12 chr19:53740000-53756800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr19:53740200-53750600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
14 chr19:53740200-53752600 ZNF genes & repeats Brain Hippocampus Middle brain
15 chr19:53740200-53756800 ZNF genes & repeats Fetal Lung lung
16 chr19:53740200-53757600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:53740400-53756800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
18 chr19:53740600-53750600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
19 chr19:53743000-53750800 ZNF genes & repeats Fetal Intestine Large intestine
20 chr19:53743000-53756600 ZNF genes & repeats Primary hematopoietic stem cells blood
21 chr19:53744800-53750600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
22 chr19:53745200-53756600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr19:53747200-53749600 Weak transcription H9 Cell Line embryonic stem cell
24 chr19:53747200-53752400 Weak transcription Rectal Smooth Muscle rectum
25 chr19:53747400-53749800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr19:53747400-53753600 Weak transcription Placenta Amnion Placenta Amnion
27 chr19:53747400-53754600 Weak transcription HSMMtube muscle
28 chr19:53747600-53749600 Weak transcription Fetal Brain Male brain
29 chr19:53747600-53750200 Weak transcription NHLF lung
30 chr19:53747600-53750400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr19:53747600-53753400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr19:53747600-53753400 Weak transcription Pancreas Pancrea
33 chr19:53747600-53753600 Weak transcription Thymus Thymus
34 chr19:53747600-53754400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr19:53747800-53750400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr19:53747800-53750400 Weak transcription HSMM muscle
37 chr19:53747800-53753400 Weak transcription Gastric stomach
38 chr19:53747800-53753600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr19:53747800-53753600 Weak transcription Right Ventricle heart
40 chr19:53747800-53755400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr19:53747800-53757000 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr19:53748400-53751600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr19:53748400-53757400 Weak transcription Colonic Mucosa Colon
44 chr19:53748600-53749800 Weak transcription Stomach Smooth Muscle stomach
45 chr19:53748800-53749600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr19:53748800-53749800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr19:53748800-53749800 ZNF genes & repeats Fetal Stomach stomach
48 chr19:53748800-53750800 Strong transcription Left Ventricle heart
49 chr19:53748800-53752200 Weak transcription Osteobl bone
50 chr19:53749000-53749800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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