Variant report

Variant	rs4803155
Chromosome Location	chr19:39470280-39470281
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
FBXO17	TF binding region
ENSG00000128626	Chromatin interaction
ENSG00000104835	Chromatin interaction
ENSG00000161243	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs672685	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057899	chr19:39088319-39475493	Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:39467400-39470400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:39467400-39471200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr19:39467600-39470400	Weak transcription	K562	blood
4	chr19:39467600-39471400	Weak transcription	Brain Hippocampus Middle	brain
5	chr19:39467600-39471400	Weak transcription	Fetal Muscle Trunk	muscle
6	chr19:39469400-39470400	Weak transcription	Liver	Liver
7	chr19:39469400-39471400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr19:39470200-39471800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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