The 2.0 version of rSNPBase

Variant report

Variant rs4808974
Chromosome Location chr19:19733964-19733965
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19729800-19734600 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:19729800-19738600 Weak transcription Right Atrium heart
3 chr19:19729800-19744400 Weak transcription HSMMtube muscle
4 chr19:19730000-19734200 Weak transcription K562 blood
5 chr19:19730000-19734400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr19:19730000-19734600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:19730000-19734600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr19:19730000-19734600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr19:19730000-19734800 Weak transcription Lung lung
10 chr19:19730000-19737000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr19:19730000-19737400 Weak transcription HMEC breast
12 chr19:19730000-19738000 Weak transcription Adipose Nuclei Adipose
13 chr19:19730000-19738000 Weak transcription NHEK skin
14 chr19:19730000-19738200 Weak transcription Rectal Smooth Muscle rectum
15 chr19:19730200-19734200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr19:19730200-19734400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr19:19730200-19734400 Weak transcription Fetal Intestine Large intestine
18 chr19:19730200-19734600 Weak transcription Spleen Spleen
19 chr19:19730200-19734800 Weak transcription Fetal Intestine Small intestine
20 chr19:19730200-19734800 Weak transcription Ovary ovary
21 chr19:19730200-19734800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr19:19730200-19737000 Weak transcription Primary hematopoietic stem cells blood
23 chr19:19730200-19737000 Weak transcription GM12878-XiMat blood
24 chr19:19730200-19737200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr19:19730200-19737400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr19:19730200-19738000 Weak transcription Duodenum Mucosa Duodenum
27 chr19:19730200-19738200 Weak transcription Brain Anterior Caudate brain
28 chr19:19730200-19738200 Weak transcription Brain Hippocampus Middle brain
29 chr19:19730200-19740200 Weak transcription Dnd41 blood
30 chr19:19730400-19734200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr19:19730400-19734200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr19:19730400-19734400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr19:19730400-19734400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr19:19730400-19734400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr19:19730400-19734400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr19:19730400-19734400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr19:19730400-19734600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr19:19730400-19734600 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr19:19730400-19734600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr19:19730400-19734600 Weak transcription Fetal Thymus thymus
41 chr19:19730400-19734600 Weak transcription Gastric stomach
42 chr19:19730400-19736000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr19:19730400-19737000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr19:19730400-19737000 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr19:19730400-19737800 Weak transcription Primary B cells from cord blood blood
46 chr19:19730400-19737800 Weak transcription Primary B cells from peripheral blood blood
47 chr19:19730400-19738200 Weak transcription Brain Cingulate Gyrus brain
48 chr19:19730600-19734200 Weak transcription Pancreas Pancrea
49 chr19:19730600-19734400 Weak transcription H1 Cell Line embryonic stem cell
50 chr19:19730600-19734400 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015