The 2.0 version of rSNPBase

Variant report

Variant rs4820012
Chromosome Location chr22:30827165-30827166
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30822400-30834400 Weak transcription Small Intestine intestine
2 chr22:30822600-30831600 Weak transcription Right Atrium heart
3 chr22:30822600-30832000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr22:30822800-30828000 Weak transcription Fetal Intestine Large intestine
5 chr22:30822800-30828200 Weak transcription Ovary ovary
6 chr22:30822800-30831600 Weak transcription Right Ventricle heart
7 chr22:30822800-30832000 Weak transcription Left Ventricle heart
8 chr22:30823000-30827200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr22:30823000-30831000 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr22:30823000-30831000 Weak transcription NH-A brain
11 chr22:30823000-30831200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr22:30823000-30831200 Weak transcription Fetal Thymus thymus
13 chr22:30823000-30831600 Weak transcription Colonic Mucosa Colon
14 chr22:30823200-30831000 Weak transcription Primary B cells from peripheral blood blood
15 chr22:30823200-30831000 Weak transcription HUVEC blood vessel
16 chr22:30823200-30831200 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr22:30823200-30831600 Weak transcription Thymus Thymus
18 chr22:30823200-30831600 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr22:30823200-30833600 Weak transcription Stomach Mucosa stomach
20 chr22:30823400-30828000 Weak transcription HepG2 liver
21 chr22:30823400-30829600 Weak transcription HMEC breast
22 chr22:30823400-30830200 Weak transcription Lung lung
23 chr22:30823400-30830800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr22:30823600-30827200 Weak transcription Stomach Smooth Muscle stomach
25 chr22:30823600-30828600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr22:30823600-30830800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr22:30823800-30830600 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr22:30824000-30830600 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr22:30824400-30831400 Weak transcription Placenta Placenta
30 chr22:30824400-30839000 Weak transcription Hela-S3 cervix
31 chr22:30824600-30829400 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr22:30824600-30829600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr22:30824600-30831600 Weak transcription A549 lung
34 chr22:30824800-30831200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr22:30824800-30831200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr22:30824800-30831400 Weak transcription H9 Cell Line embryonic stem cell
37 chr22:30824800-30834400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr22:30825000-30827200 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr22:30825000-30827600 Weak transcription Liver Liver
40 chr22:30825000-30828000 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr22:30825000-30829600 Weak transcription NHEK skin
42 chr22:30825000-30830800 Weak transcription K562 blood
43 chr22:30825000-30831200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr22:30825000-30831600 Weak transcription Muscle Satellite Cultured Cells --
45 chr22:30825000-30831600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr22:30825200-30828000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr22:30825200-30829600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr22:30825200-30831000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr22:30825200-30831000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr22:30825200-30831000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015