Variant report

Variant	rs4844958
Chromosome Location	chr1:210361388-210361389
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12133399	0.82[EUR][1000 genomes]
rs12134437	0.83[EUR][1000 genomes]
rs1361182	0.90[EUR][1000 genomes]
rs1361183	0.91[EUR][1000 genomes]
rs1933474	0.95[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs2485901	0.90[EUR][1000 genomes]
rs2485903	0.90[EUR][1000 genomes]
rs2494167	0.83[EUR][1000 genomes]
rs2494174	0.90[EUR][1000 genomes]
rs2494177	0.90[EUR][1000 genomes]
rs34573048	0.80[EUR][1000 genomes]
rs815357	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014034	chr1:209759648-210501731	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210360000-210362400	Enhancers	HSMMtube	muscle
2	chr1:210360800-210362800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr1:210361000-210362200	Enhancers	HMEC	breast
4	chr1:210361000-210362400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr1:210361200-210362000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr1:210361200-210362400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr1:210361200-210362400	Enhancers	Muscle Satellite Cultured Cells	--
8	chr1:210361200-210362400	Enhancers	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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