Variant report

Variant	rs4845034
Chromosome Location	chr1:210638848-210638849
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:210636990..210639038-chr1:210644516..210646058,2	MCF-7	breast:
2	chr1:210638414..210639957-chr1:210641526..210644422,2	K562	blood:
3	chr1:210627850..210630784-chr1:210637225..210638957,2	K562	blood:
4	chr1:210544521..210546591-chr1:210638749..210641083,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17016247	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72747449	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs926574	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4376	chr1:210627620-210672326	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2497060	chr1:210638608-210640022	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210571400-210641000	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr1:210611600-210639600	Weak transcription	Aorta	Aorta
3	chr1:210614600-210641200	Weak transcription	Gastric	stomach
4	chr1:210626200-210650000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr1:210628400-210640800	Weak transcription	Stomach Smooth Muscle	stomach
6	chr1:210630000-210641200	Weak transcription	Primary hematopoietic stem cells	blood
7	chr1:210630200-210641400	Weak transcription	Liver	Liver
8	chr1:210631000-210644200	Weak transcription	Fetal Muscle Leg	muscle
9	chr1:210631000-210653800	Weak transcription	Colon Smooth Muscle	Colon
10	chr1:210631200-210640200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr1:210632000-210639000	Weak transcription	Lung	lung
12	chr1:210635800-210639800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr1:210636000-210639400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr1:210636000-210641000	Weak transcription	Ovary	ovary
15	chr1:210636400-210646000	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr1:210637200-210640800	Weak transcription	Right Ventricle	heart
17	chr1:210637400-210640600	Weak transcription	Spleen	Spleen
18	chr1:210637800-210639800	Strong transcription	HSMMtube	muscle
19	chr1:210637800-210640000	Strong transcription	Left Ventricle	heart
20	chr1:210638000-210641200	Strong transcription	HSMM	muscle
21	chr1:210638200-210642400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr1:210638400-210644400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr1:210638800-210640400	Strong transcription	Breast Myoepithelial Primary Cells	Breast

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