Variant report

Variant rs4845939
Chromosome Location chr1:10701809-10701810
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:10691600-10703000 Weak transcription Primary B cells from peripheral blood blood
3 chr1:10691600-10706000 Weak transcription Dnd41 blood
4 chr1:10696200-10704000 Weak transcription HSMMtube muscle
5 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
6 chr1:10697800-10703400 Weak transcription HMEC breast
7 chr1:10698200-10713600 Weak transcription Small Intestine intestine
8 chr1:10698400-10703200 Weak transcription NHEK skin
9 chr1:10698600-10703000 Weak transcription Primary T cells fromperipheralblood blood
10 chr1:10698600-10705600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:10698800-10704600 Weak transcription Primary B cells from cord blood blood
12 chr1:10698800-10704600 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr1:10698800-10726400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr1:10699000-10712400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:10699000-10713600 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:10699000-10714000 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:10699000-10723000 Weak transcription Psoas Muscle Psoas
19 chr1:10699400-10702000 Genic enhancers Skeletal Muscle Male skeletal muscle
20 chr1:10699400-10702000 Genic enhancers Skeletal Muscle Female skeletal muscle
21 chr1:10699400-10702200 Bivalent Enhancer Fetal Muscle Leg muscle
22 chr1:10699400-10702200 Bivalent Enhancer Fetal Stomach stomach
23 chr1:10699400-10702200 Genic enhancers Right Ventricle heart
24 chr1:10699400-10709600 Strong transcription Duodenum Mucosa Duodenum
25 chr1:10699400-10709800 Strong transcription Colonic Mucosa Colon
26 chr1:10699600-10702000 Bivalent Enhancer Fetal Muscle Trunk muscle
27 chr1:10699600-10703400 Enhancers Fetal Heart heart
28 chr1:10700000-10702000 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr1:10700000-10702400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:10700000-10704600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:10700000-10706200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:10700000-10707600 Weak transcription Primary T cells from cord blood blood
33 chr1:10700200-10708600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr1:10700200-10709400 Weak transcription H9 Cell Line embryonic stem cell
35 chr1:10700400-10702800 Strong transcription Spleen Spleen
36 chr1:10700400-10703000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr1:10700400-10722800 Weak transcription Ovary ovary
38 chr1:10700600-10702200 Genic enhancers Fetal Intestine Large intestine
39 chr1:10700600-10702200 Genic enhancers Stomach Mucosa stomach
40 chr1:10700800-10702000 Enhancers HepG2 liver
41 chr1:10700800-10702200 Genic enhancers Gastric stomach
42 chr1:10700800-10702600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:10700800-10702800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:10701000-10703000 Weak transcription Fetal Brain Male brain
45 chr1:10701000-10703200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:10701000-10706200 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr1:10701200-10702800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:10701200-10703200 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr1:10701200-10705600 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr1:10701200-10706200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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