The 2.0 version of rSNPBase

Variant report

Variant rs4846186
Chromosome Location chr1:10049698-10049699
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10028400-10050000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:10032800-10057000 Weak transcription Psoas Muscle Psoas
3 chr1:10035600-10051800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr1:10036000-10050400 Weak transcription Primary hematopoietic stem cells blood
5 chr1:10036800-10051200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:10037200-10054600 Weak transcription Fetal Brain Female brain
7 chr1:10039400-10050800 Weak transcription Colonic Mucosa Colon
8 chr1:10039600-10053600 Weak transcription Colon Smooth Muscle Colon
9 chr1:10042600-10050200 Weak transcription Lung lung
10 chr1:10042600-10050800 Weak transcription GM12878-XiMat blood
11 chr1:10042600-10053800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:10042800-10049800 Weak transcription Placenta Placenta
13 chr1:10042800-10049800 Weak transcription Right Ventricle heart
14 chr1:10042800-10050200 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:10042800-10050600 Weak transcription Pancreas Pancrea
16 chr1:10042800-10050800 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:10042800-10051200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:10042800-10051200 Weak transcription HSMMtube muscle
19 chr1:10042800-10051600 Weak transcription Fetal Thymus thymus
20 chr1:10042800-10051600 Weak transcription Rectal Smooth Muscle rectum
21 chr1:10042800-10053000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr1:10042800-10055600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:10042800-10056600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr1:10042800-10057200 Weak transcription Gastric stomach
25 chr1:10043000-10050400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:10043000-10050600 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:10044200-10050000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:10044200-10050000 Weak transcription Left Ventricle heart
29 chr1:10044200-10050400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:10044200-10050400 Weak transcription Stomach Smooth Muscle stomach
31 chr1:10044200-10050600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr1:10044200-10050800 Weak transcription Muscle Satellite Cultured Cells --
33 chr1:10044400-10049800 Weak transcription Spleen Spleen
34 chr1:10044400-10050200 Weak transcription Primary T cells from cord blood blood
35 chr1:10044600-10050000 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr1:10044600-10050800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:10044600-10054800 Weak transcription Fetal Intestine Large intestine
38 chr1:10044800-10051000 Weak transcription Primary B cells from peripheral blood blood
39 chr1:10044800-10056000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:10045200-10050000 Weak transcription Primary B cells from cord blood blood
41 chr1:10045200-10050000 Weak transcription Fetal Muscle Trunk muscle
42 chr1:10045200-10053200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:10045400-10050000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr1:10045400-10050200 Weak transcription Fetal Muscle Leg muscle
45 chr1:10045400-10050600 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:10045400-10051600 Weak transcription Duodenum Mucosa Duodenum
47 chr1:10045400-10056600 Weak transcription Brain Angular Gyrus brain
48 chr1:10045400-10057000 Weak transcription Brain Substantia Nigra brain
49 chr1:10045600-10056600 Weak transcription Brain Hippocampus Middle brain
50 chr1:10045600-10056600 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015