Variant report

Variant	rs4846738
Chromosome Location	chr1:222098473-222098474
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10779463	0.82[EUR][1000 genomes]
rs10863668	0.81[EUR][1000 genomes]
rs10863669	0.86[ASN][1000 genomes]
rs11584907	0.81[EUR][1000 genomes]
rs1416894	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2039806	0.84[EUR][1000 genomes]
rs2185326	0.85[CEU][hapmap];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2790754	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2790756	0.95[CEU][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2800841	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2800845	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2800853	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:222087600-222099200	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr1:222094800-222099200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr1:222095400-222117800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr1:222098000-222099000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr1:222098000-222099200	Weak transcription	HSMM	muscle
6	chr1:222098000-222099200	Weak transcription	Osteobl	bone
7	chr1:222098000-222118800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr1:222098200-222098600	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr1:222098200-222099000	Weak transcription	NHDF-Ad	bronchial

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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