The 2.0 version of rSNPBase

Variant report

Variant rs4855368
Chromosome Location chr3:69290866-69290867
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:69253000-69297600 Weak transcription Gastric stomach
2 chr3:69254600-69299000 Weak transcription Fetal Brain Male brain
3 chr3:69269000-69301400 Weak transcription HMEC breast
4 chr3:69273800-69301400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr3:69276000-69291800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:69281200-69303400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr3:69282000-69291200 Weak transcription HSMMtube muscle
8 chr3:69282000-69297400 Weak transcription Brain Germinal Matrix brain
9 chr3:69283600-69295800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:69286400-69292400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr3:69286400-69292600 Weak transcription Aorta Aorta
12 chr3:69286400-69299000 Weak transcription Colonic Mucosa Colon
13 chr3:69286400-69299000 Weak transcription Left Ventricle heart
14 chr3:69286600-69291800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr3:69286600-69292200 Weak transcription Fetal Lung lung
16 chr3:69286600-69292200 Weak transcription NHEK skin
17 chr3:69286600-69292400 Weak transcription Brain Anterior Caudate brain
18 chr3:69286600-69292400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:69286600-69297600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr3:69286600-69298600 Weak transcription Rectal Smooth Muscle rectum
21 chr3:69286600-69299000 Weak transcription Adipose Nuclei Adipose
22 chr3:69286800-69291800 Weak transcription Hela-S3 cervix
23 chr3:69286800-69292000 Weak transcription Pancreas Pancrea
24 chr3:69286800-69292400 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr3:69286800-69292400 Weak transcription Right Atrium heart
26 chr3:69286800-69297400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr3:69286800-69297800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr3:69286800-69298600 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr3:69286800-69298800 Weak transcription Right Ventricle heart
30 chr3:69286800-69299200 Weak transcription Esophagus oesophagus
31 chr3:69286800-69300800 Weak transcription Placenta Placenta
32 chr3:69287000-69291800 Weak transcription Primary hematopoietic stem cells blood
33 chr3:69287000-69298600 Weak transcription Fetal Muscle Leg muscle
34 chr3:69287200-69291800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr3:69287200-69291800 Weak transcription Fetal Thymus thymus
36 chr3:69287200-69292400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr3:69287200-69299000 Weak transcription Fetal Muscle Trunk muscle
38 chr3:69287200-69299200 Weak transcription Lung lung
39 chr3:69287600-69297600 Weak transcription Brain Substantia Nigra brain
40 chr3:69288000-69298200 Weak transcription Fetal Brain Female brain
41 chr3:69288200-69291400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr3:69288400-69291000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr3:69288600-69291200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr3:69288600-69292400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr3:69288600-69293200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr3:69289600-69293600 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr3:69289800-69291000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr3:69289800-69291000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr3:69289800-69291400 Enhancers H1 Cell Line embryonic stem cell
50 chr3:69289800-69291400 Enhancers HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015