Variant report

Variant	rs4864814
Chromosome Location	chr4:54545763-54545764
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17083344	1.00[EUR][1000 genomes]
rs4864478	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829936	chr4:54367783-54556123	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54543200-54547800	Weak transcription	NHDF-Ad	bronchial
2	chr4:54543200-54550400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr4:54543400-54547600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr4:54543400-54548000	Weak transcription	Osteobl	bone
5	chr4:54543600-54547800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr4:54543600-54548000	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr4:54545200-54545800	Enhancers	Fetal Stomach	stomach
8	chr4:54545600-54546200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links