Variant report

Variant	rs4871623
Chromosome Location	chr8:126627899-126627900
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs12680046	0.82[ASN][1000 genomes]
rs13282254	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv6377	chr8:126579620-126639253	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv38	chr8:126593465-126639253	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	esv3376403	chr8:126624370-126628568	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126624000-126628200	Enhancers	Fetal Muscle Leg	muscle
2	chr8:126624600-126628000	Enhancers	Placenta	Placenta
3	chr8:126627200-126628200	Enhancers	Fetal Muscle Trunk	muscle
4	chr8:126627200-126633400	Weak transcription	Adipose Nuclei	Adipose
5	chr8:126627600-126628000	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr8:126627600-126628000	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr8:126627600-126628000	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr8:126627800-126628000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr8:126627800-126628000	Enhancers	Brain Hippocampus Middle	brain
10	chr8:126627800-126628200	Weak transcription	Fetal Heart	heart
11	chr8:126627800-126632200	Weak transcription	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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