Variant report

Variant rs4886880
Chromosome Location chr15:77862610-77862611
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77860000-77862800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:77860800-77862800 Enhancers Fetal Muscle Leg muscle
3 chr15:77861800-77862800 Enhancers Fetal Muscle Trunk muscle
4 chr15:77862000-77862800 Enhancers Fetal Intestine Small intestine
5 chr15:77862000-77869400 Weak transcription Brain Anterior Caudate brain
6 chr15:77862200-77862800 Enhancers Placenta Placenta
7 chr15:77862200-77868200 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr15:77862200-77869000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr15:77862200-77875000 Weak transcription Left Ventricle heart
10 chr15:77862400-77862800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr15:77862400-77862800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr15:77862400-77862800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
13 chr15:77862400-77863000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr15:77862400-77863600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr15:77862400-77863600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr15:77862400-77864800 Weak transcription Brain Hippocampus Middle brain
17 chr15:77862400-77865800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr15:77862400-77866600 Weak transcription Lung lung
19 chr15:77862400-77867200 Weak transcription Stomach Mucosa stomach
20 chr15:77862400-77868000 Weak transcription Duodenum Mucosa Duodenum
21 chr15:77862400-77868800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr15:77862400-77869400 Weak transcription Brain Angular Gyrus brain
23 chr15:77862400-77869400 Weak transcription Brain Substantia Nigra brain
24 chr15:77862600-77862800 Enhancers HepG2 liver
25 chr15:77862600-77863600 Weak transcription Fetal Stomach stomach
26 chr15:77862600-77865800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr15:77862600-77868000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr15:77862600-77869400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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