Variant report
Variant | rs4893174 |
---|---|
Chromosome Location | chrX:91499738-91499739 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chrX:91499241..91501193-chrX:91506650..91509117,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10522057 | 1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap] |
rs12010366 | 0.81[ASW][hapmap];0.89[CHB][hapmap];0.81[CHD][hapmap];0.86[GIH][hapmap] |
rs17274218 | 0.89[CHB][hapmap];0.81[CHD][hapmap] |
rs34636359 | 0.81[ASW][hapmap];0.89[CHB][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv432350 | chrX:91158935-91590765 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
2 | esv3435339 | chrX:91427773-91539017 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
3 | nsv532885 | chrX:91428554-92377178 | Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
4 | nsv533436 | chrX:91434301-91519622 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |