Variant report

Variant rs4894056
Chromosome Location chr2:179728848-179728849
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179695800-179738400 Weak transcription Fetal Intestine Large intestine
2 chr2:179702200-179749200 Weak transcription Thymus Thymus
3 chr2:179702400-179729200 Weak transcription Lung lung
4 chr2:179702400-179730000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:179710800-179782800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr2:179713400-179729200 Weak transcription Primary B cells from peripheral blood blood
7 chr2:179713400-179778600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr2:179717000-179790600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr2:179724200-179729600 Weak transcription Brain Substantia Nigra brain
10 chr2:179724200-179730400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr2:179724600-179733400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr2:179724800-179729000 Weak transcription Brain Anterior Caudate brain
13 chr2:179724800-179730000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr2:179724800-179732800 Weak transcription Brain Angular Gyrus brain
15 chr2:179725800-179729200 Weak transcription Brain Hippocampus Middle brain
16 chr2:179726200-179730400 Weak transcription Fetal Brain Male brain
17 chr2:179726400-179733400 Strong transcription Primary T regulatory cells fromperipheralblood blood
18 chr2:179726800-179729800 Enhancers iPS-18 Cell Line embryonic stem cell
19 chr2:179727000-179729600 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr2:179727800-179729000 Enhancers HSMM muscle
21 chr2:179727800-179729400 Enhancers Fetal Lung lung
22 chr2:179727800-179730600 Enhancers HUVEC blood vessel
23 chr2:179727800-179730800 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr2:179727800-179730800 Enhancers NHDF-Ad bronchial
25 chr2:179727800-179731200 Strong transcription Primary T cells from cord blood blood
26 chr2:179728000-179729000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:179728000-179729600 Enhancers HUES48 Cell Line embryonic stem cell
28 chr2:179728000-179729800 Flanking Active TSS Muscle Satellite Cultured Cells --
29 chr2:179728000-179730400 Enhancers Brain Germinal Matrix brain
30 chr2:179728000-179730600 Enhancers NH-A brain
31 chr2:179728200-179729200 Enhancers HUES64 Cell Line embryonic stem cell
32 chr2:179728200-179729400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:179728200-179729400 Flanking Active TSS NHLF lung
34 chr2:179728200-179729800 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr2:179728200-179753800 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr2:179728400-179729000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:179728400-179729200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:179728400-179729200 Enhancers NHEK skin
39 chr2:179728400-179729400 Enhancers H1 Cell Line embryonic stem cell
40 chr2:179728400-179729400 Flanking Active TSS Fetal Muscle Leg muscle
41 chr2:179728400-179729600 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr2:179728400-179729600 Enhancers HUES6 Cell Line embryonic stem cell
43 chr2:179728400-179729600 Flanking Active TSS HSMMtube muscle
44 chr2:179728400-179730400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr2:179728400-179730600 Strong transcription Primary T helper naive cells fromperipheralblood blood
46 chr2:179728400-179730600 Enhancers Hela-S3 cervix
47 chr2:179728400-179731000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr2:179728600-179729000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr2:179728600-179729000 Flanking Active TSS Colon Smooth Muscle Colon
50 chr2:179728600-179729000 Active TSS Right Ventricle heart

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