Variant report

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs17108618	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs4902995	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
3	nsv1041492	chr14:72634606-72768970	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72652400-72654200	Enhancers	Fetal Stomach	stomach
2	chr14:72652400-72655000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr14:72652400-72655000	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr14:72652800-72654000	Enhancers	Brain Anterior Caudate	brain
5	chr14:72652800-72654200	Enhancers	Brain Cingulate Gyrus	brain
6	chr14:72652800-72654200	Enhancers	Right Ventricle	heart
7	chr14:72652800-72654200	Enhancers	Stomach Smooth Muscle	stomach
8	chr14:72652800-72654400	Enhancers	Duodenum Smooth Muscle	Duodenum
9	chr14:72652800-72655000	Enhancers	Fetal Lung	lung
10	chr14:72652800-72655200	Enhancers	Adipose Nuclei	Adipose
11	chr14:72652800-72655200	Enhancers	Aorta	Aorta
12	chr14:72653000-72654200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr14:72653000-72654200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
14	chr14:72653400-72654200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr14:72653400-72654200	Enhancers	Ovary	ovary
16	chr14:72653600-72654400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr14:72653600-72683000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr14:72653800-72654800	Weak transcription	Fetal Kidney	kidney
19	chr14:72653800-72655000	Weak transcription	Left Ventricle	heart
20	chr14:72653800-72655000	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr14:72653800-72658800	Weak transcription	Right Atrium	heart

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