Variant report

Variant	rs4904166
Chromosome Location	chr14:84638109-84638110
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1676066	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17704274	0.92[EUR][1000 genomes]
rs7145091	0.99[ASN][1000 genomes]
rs7147015	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];0.95[MEX][hapmap];0.87[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7158606	0.91[EUR][1000 genomes]
rs7160136	0.92[EUR][1000 genomes]
rs8012432	0.91[EUR][1000 genomes]
rs8021077	0.87[CHB][hapmap];1.00[JPT][hapmap]
rs8021537	0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv565376	chr14:84612088-84644822	Enhancers Weak transcription	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv976360	chr14:84637552-84639420	Inactive region	TF binding region lncRNA	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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