The 2.0 version of rSNPBase

Variant report

Variant rs4928066
Chromosome Location chr3:100282487-100282488
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100241000-100299800 Weak transcription Fetal Muscle Leg muscle
2 chr3:100253800-100289000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:100253800-100289000 Weak transcription Aorta Aorta
4 chr3:100265800-100300600 Weak transcription HepG2 liver
5 chr3:100270800-100291000 Weak transcription Colon Smooth Muscle Colon
6 chr3:100273400-100288600 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr3:100273400-100297000 Weak transcription Pancreas Pancrea
8 chr3:100276000-100282600 Weak transcription HSMMtube muscle
9 chr3:100276800-100282600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr3:100276800-100309200 Weak transcription NH-A brain
11 chr3:100277200-100298000 Weak transcription Fetal Muscle Trunk muscle
12 chr3:100277600-100304200 Weak transcription Ovary ovary
13 chr3:100278200-100305800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr3:100279800-100282600 Enhancers HMEC breast
15 chr3:100280000-100282800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:100280200-100283800 Enhancers Primary neutrophils fromperipheralblood blood
17 chr3:100280800-100283200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr3:100280800-100289000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr3:100281000-100287800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr3:100281200-100300200 Weak transcription Osteobl bone
21 chr3:100281400-100282600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr3:100281400-100282600 Weak transcription Fetal Stomach stomach
23 chr3:100281400-100282800 Enhancers NHEK skin
24 chr3:100281600-100287600 Weak transcription Fetal Lung lung
25 chr3:100281600-100289200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:100281800-100282600 Enhancers Placenta Amnion Placenta Amnion
27 chr3:100281800-100282800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr3:100281800-100282800 Enhancers Fetal Heart heart
29 chr3:100281800-100283600 Enhancers HSMM muscle
30 chr3:100281800-100287800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr3:100282000-100291600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr3:100282200-100283000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr3:100282200-100283000 Enhancers Primary monocytes fromperipheralblood blood
34 chr3:100282200-100283200 Enhancers Monocytes-CD14+_RO01746 blood
35 chr3:100282200-100287600 Weak transcription Liver Liver
36 chr3:100282400-100283400 Enhancers Muscle Satellite Cultured Cells --
37 chr3:100282400-100287800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr3:100282400-100296800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015