Variant report

Variant rs4941713
Chromosome Location chr13:52399043-52399044
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52392400-52404800 Enhancers Primary monocytes fromperipheralblood blood
2 chr13:52392600-52399600 Weak transcription Fetal Lung lung
3 chr13:52392800-52401800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
4 chr13:52393600-52406200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr13:52393600-52418600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr13:52393800-52399200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr13:52393800-52399200 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr13:52393800-52399200 Weak transcription Adipose Nuclei Adipose
9 chr13:52393800-52400000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr13:52394000-52399400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr13:52394000-52399600 Weak transcription Left Ventricle heart
12 chr13:52394000-52399800 Weak transcription Right Ventricle heart
13 chr13:52394200-52399800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr13:52394600-52400200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
15 chr13:52395200-52399200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
16 chr13:52396000-52399200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr13:52396000-52400000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
18 chr13:52396400-52399200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr13:52396600-52399600 Active TSS Primary T killer naive cells fromperipheralblood blood
20 chr13:52396600-52400400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr13:52396600-52404000 Enhancers Primary hematopoietic stem cells short term culture blood
22 chr13:52396600-52404600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr13:52397000-52399200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr13:52397000-52400200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr13:52397200-52399600 Enhancers HSMM muscle
26 chr13:52397400-52400400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr13:52397600-52400600 Weak transcription Spleen Spleen
28 chr13:52397800-52399600 Active TSS Primary T helper naive cells fromperipheralblood blood
29 chr13:52397800-52400000 Active TSS Primary T cells from cord blood blood
30 chr13:52398000-52399200 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr13:52398000-52400800 Flanking Active TSS Primary B cells from cord blood blood
32 chr13:52398000-52401000 Enhancers HSMMtube muscle
33 chr13:52398000-52404400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
34 chr13:52398200-52399200 Weak transcription Fetal Heart heart
35 chr13:52398200-52404200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr13:52398400-52399400 Weak transcription Brain Anterior Caudate brain
37 chr13:52398400-52400600 Weak transcription Brain Hippocampus Middle brain
38 chr13:52398400-52401600 Enhancers Primary B cells from peripheral blood blood
39 chr13:52398600-52399200 Active TSS Sigmoid Colon Sigmoid Colon
40 chr13:52398600-52399400 Flanking Active TSS Fetal Thymus thymus
41 chr13:52398600-52399400 Active TSS Rectal Mucosa Donor 29 rectum
42 chr13:52398600-52399600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr13:52398600-52400200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
44 chr13:52398600-52401000 Weak transcription Fetal Stomach stomach
45 chr13:52398600-52402200 Enhancers Colon Smooth Muscle Colon
46 chr13:52398600-52402800 Enhancers Primary Natural Killer cells fromperipheralblood blood
47 chr13:52398800-52399400 Weak transcription Rectal Smooth Muscle rectum
48 chr13:52398800-52399600 Active TSS Primary T regulatory cells fromperipheralblood blood
49 chr13:52398800-52400000 Flanking Active TSS Primary T cells fromperipheralblood blood
50 chr13:52398800-52400800 Weak transcription Brain Substantia Nigra brain

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