The 2.0 version of rSNPBase

Variant report

Variant rs4949774
Chromosome Location chr1:77633591-77633592
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77595400-77640400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:77606200-77651600 Weak transcription Aorta Aorta
3 chr1:77614400-77634000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr1:77614400-77634000 Weak transcription Osteobl bone
5 chr1:77614400-77635600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:77614400-77635600 Weak transcription NHDF-Ad bronchial
7 chr1:77616200-77663200 Weak transcription Brain Hippocampus Middle brain
8 chr1:77617200-77636000 Weak transcription HSMM muscle
9 chr1:77618600-77634600 Weak transcription Right Ventricle heart
10 chr1:77619000-77638000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:77619000-77640200 Weak transcription A549 lung
12 chr1:77621000-77641600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:77621800-77634000 Weak transcription Muscle Satellite Cultured Cells --
14 chr1:77622600-77633800 Weak transcription HUVEC blood vessel
15 chr1:77623200-77639400 Weak transcription Fetal Lung lung
16 chr1:77623400-77641000 Weak transcription Rectal Smooth Muscle rectum
17 chr1:77625000-77634200 Weak transcription Esophagus oesophagus
18 chr1:77625600-77634600 Weak transcription Pancreas Pancrea
19 chr1:77625600-77637800 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:77625800-77635200 Weak transcription Fetal Intestine Small intestine
21 chr1:77625800-77640000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr1:77626000-77634000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:77626000-77635600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:77626000-77637800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:77626000-77639800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:77626000-77640600 Weak transcription Brain Substantia Nigra brain
27 chr1:77626000-77662600 Weak transcription Thymus Thymus
28 chr1:77626000-77684200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:77626200-77634000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:77626200-77634600 Weak transcription Fetal Thymus thymus
31 chr1:77626200-77637800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:77626200-77639400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:77626800-77639400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:77626800-77668000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:77626800-77674800 Weak transcription Ovary ovary
36 chr1:77626800-77676200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:77627200-77634000 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr1:77627200-77638600 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr1:77627200-77641000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr1:77627800-77635600 Weak transcription Primary hematopoietic stem cells blood
41 chr1:77628000-77634200 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:77628000-77635800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr1:77628000-77636000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:77629000-77634000 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr1:77629000-77637800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:77629000-77642000 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr1:77629200-77634600 Weak transcription Primary B cells from peripheral blood blood
48 chr1:77630200-77637200 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr1:77630400-77639200 Weak transcription Dnd41 blood
50 chr1:77630400-77641200 Weak transcription NH-A brain

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Last update: Aug 31, 2015