Variant report

Variant	rs4950378
Chromosome Location	chr1:146625769-146625770
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:146599581..146601271-chr1:146625400..146627137,2	K562	blood:
2	chr1:146578104..146580679-chr1:146623969..146626202,2	MCF-7	breast:
3	chr1:146624878..146626860-chr1:146707008..146708792,2	K562	blood:
4	chr1:146554825..146557701-chr1:146623843..146627168,3	MCF-7	breast:
5	chr1:146625650..146629036-chr1:146636126..146639044,3	MCF-7	breast:
6	chr1:146624650..146626363-chr1:146626882..146628958,2	MCF-7	breast:
7	chr1:146591056..146593817-chr1:146625577..146627628,2	K562	blood:
8	chr1:146610691..146613596-chr1:146624055..146626822,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000230832	Chromatin interaction

Extended variants
information (count: 92 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:72)

rs_ID	r²[population]
rs1036850	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1036851	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1036852	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.96[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1047140	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10751402	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10751403	1.00[YRI][hapmap]
rs10793652	0.81[CEU][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.83[ASN][1000 genomes]
rs10793653	1.00[JPT][hapmap];0.83[MEX][hapmap];0.83[ASN][1000 genomes]
rs10900314	0.92[CEU][hapmap];0.82[CHB][hapmap];0.91[CHD][hapmap];0.85[LWK][hapmap];0.97[TSI][hapmap];0.85[EUR][1000 genomes]
rs10900315	0.88[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10900321	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10900322	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10900323	1.00[YRI][hapmap]
rs10900326	0.81[CEU][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.82[AMR][1000 genomes]
rs11239937	1.00[YRI][hapmap]
rs11239950	0.83[ASN][1000 genomes]
rs11239951	1.00[JPT][hapmap];0.83[MEX][hapmap];0.83[ASN][1000 genomes]
rs11239953	0.96[CEU][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap];0.81[EUR][1000 genomes]
rs11239955	0.81[EUR][1000 genomes]
rs11239956	0.96[CEU][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap];0.81[EUR][1000 genomes]
rs11578109	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs12028924	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12060049	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12093458	0.81[EUR][1000 genomes]
rs12094979	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12095014	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12139680	0.83[ASN][1000 genomes]
rs12144240	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1348316	0.85[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1442758	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1442760	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.96[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1561880	1.00[YRI][hapmap]
rs17359526	0.89[CEU][hapmap];0.82[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];0.97[TSI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1837983	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1837984	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1899484	1.00[YRI][hapmap]
rs1899485	0.93[CEU][hapmap];0.91[CHD][hapmap];0.90[GIH][hapmap];0.85[JPT][hapmap];0.89[LWK][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1932978	0.96[CEU][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap];0.81[EUR][1000 genomes]
rs2014107	0.82[AMR][1000 genomes]
rs2044151	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2289575	1.00[JPT][hapmap]
rs2354442	0.87[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];0.91[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34394205	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34481225	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs35143111	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4950307	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4950366	0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4950369	0.82[AMR][1000 genomes]
rs4950370	0.82[AMR][1000 genomes]
rs4950372	1.00[JPT][hapmap];0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4950380	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4950391	0.81[EUR][1000 genomes]
rs57405088	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs57649470	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6593735	0.83[AMR][1000 genomes]
rs6593738	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.92[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6593739	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6593750	0.96[CEU][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap];0.81[EUR][1000 genomes]
rs6668690	0.81[ASN][1000 genomes]
rs6672322	0.85[EUR][1000 genomes]
rs6673185	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6680845	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6687016	0.89[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6689155	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6693631	0.87[ASW][hapmap];0.89[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.96[MEX][hapmap];0.97[TSI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6704497	0.82[EUR][1000 genomes]
rs71510593	0.83[ASN][1000 genomes]
rs7548820	0.81[EUR][1000 genomes]
rs7552010	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs882344	0.85[EUR][1000 genomes]
rs894472	1.00[YRI][hapmap]
rs930495	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757753	chr1:145883119-146697542	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
2	nsv872251	chr1:146152553-146803630	Weak transcription Bivalent Enhancer Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	diseases
3	nsv872252	chr1:146471863-147398135	Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	112 gene(s)	inside rSNPs	diseases
4	nsv999546	chr1:146507577-147356574	Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
5	nsv535123	chr1:146507577-147356574	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
6	nsv492188	chr1:146507649-147381479	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
7	nsv916754	chr1:146507711-147417736	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	113 gene(s)	inside rSNPs	diseases
8	nsv547673	chr1:146510112-147398135	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
9	nsv547674	chr1:146522722-147396797	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
10	nsv998341	chr1:146531446-147384720	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
11	nsv535124	chr1:146531446-147384720	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
12	nsv1003493	chr1:146531446-147389944	Weak transcription Flanking Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
13	nsv998209	chr1:146543722-147384720	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
14	nsv535126	chr1:146543722-147384720	Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
15	nsv872255	chr1:146550780-146969712	Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
16	nsv872256	chr1:146556596-147410973	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
17	nsv1012331	chr1:146603479-147384720	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
18	nsv535131	chr1:146603479-147384720	Genic enhancers Strong transcription Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
19	nsv1009943	chr1:146618929-146893851	Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
20	nsv535132	chr1:146618929-146893851	Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs4950378	CHD1L	cis	Whole Blood	GTEx
rs4950378	CHD1L	cis	cerebellum	SCAN
rs4950378	RNF115	cis	parietal	SCAN

Chromatin state (count:109 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:146618800-146628800	Weak transcription	Lung	lung
2	chr1:146618800-146628800	Weak transcription	Spleen	Spleen
3	chr1:146619200-146630600	Weak transcription	Gastric	stomach
4	chr1:146619800-146628000	Weak transcription	HSMMtube	muscle
5	chr1:146621200-146625800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr1:146621600-146629400	Weak transcription	NHDF-Ad	bronchial
7	chr1:146622200-146627200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr1:146622400-146628000	Weak transcription	Primary T cells fromperipheralblood	blood
9	chr1:146622800-146625800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
10	chr1:146622800-146630000	Weak transcription	Small Intestine	intestine
11	chr1:146623000-146625800	Weak transcription	Primary T helper cells fromperipheralblood	blood
12	chr1:146623000-146627000	Weak transcription	Fetal Intestine Large	intestine
13	chr1:146623000-146628800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr1:146623200-146625800	Weak transcription	HMEC	breast
15	chr1:146623200-146626200	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr1:146623200-146629000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
17	chr1:146623200-146629200	Weak transcription	Brain Angular Gyrus	brain
18	chr1:146623200-146629400	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr1:146623200-146629600	Weak transcription	Fetal Brain Male	brain
20	chr1:146623400-146626000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr1:146623400-146629200	Weak transcription	Fetal Lung	lung
22	chr1:146623400-146630400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
23	chr1:146623400-146630600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr1:146623800-146628800	Weak transcription	Fetal Stomach	stomach
25	chr1:146623800-146629000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
26	chr1:146623800-146629000	Weak transcription	Brain Substantia Nigra	brain
27	chr1:146623800-146629400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr1:146623800-146629600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
29	chr1:146624000-146625800	Weak transcription	Primary B cells from peripheral blood	blood
30	chr1:146624000-146626000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr1:146624000-146627600	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr1:146624000-146628800	Weak transcription	Colon Smooth Muscle	Colon
33	chr1:146624000-146629000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr1:146624000-146629000	Weak transcription	Fetal Brain Female	brain
35	chr1:146624000-146629400	Weak transcription	Thymus	Thymus
36	chr1:146624000-146630600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr1:146624000-146631800	Weak transcription	Esophagus	oesophagus
38	chr1:146624200-146629800	Weak transcription	GM12878-XiMat	blood
39	chr1:146624200-146632800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr1:146624200-146637600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr1:146624400-146626400	Weak transcription	HUES48 Cell Line	embryonic stem cell
42	chr1:146624400-146627600	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr1:146624400-146628000	Weak transcription	Placenta	Placenta
44	chr1:146624400-146630400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr1:146624400-146636000	Strong transcription	Skeletal Muscle Female	skeletal muscle
46	chr1:146624600-146629200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
47	chr1:146624600-146630600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr1:146624600-146632200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr1:146624600-146634400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr1:146624600-146639600	Strong transcription	Primary T cells from cord blood	blood

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