Variant report

Variant rs4953620
Chromosome Location chr2:48955314-48955315
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48943400-48955400 Weak transcription Colon Smooth Muscle Colon
2 chr2:48943400-48956200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr2:48945400-48955600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr2:48947000-48955400 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr2:48947200-48956000 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr2:48947400-48955800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:48947600-48956000 Weak transcription Brain Anterior Caudate brain
8 chr2:48947600-48956600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr2:48947800-48955400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr2:48949800-48955600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:48950000-48955800 Weak transcription Fetal Stomach stomach
12 chr2:48950600-48960400 Weak transcription Ovary ovary
13 chr2:48950800-48959600 Weak transcription Adipose Nuclei Adipose
14 chr2:48952600-48955800 Weak transcription Brain Cingulate Gyrus brain
15 chr2:48952800-48956000 Weak transcription Brain Hippocampus Middle brain
16 chr2:48953400-48956200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:48954000-48957000 Enhancers Stomach Smooth Muscle stomach
18 chr2:48955000-48956600 Enhancers Fetal Heart heart
19 chr2:48955200-48957000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr2:48955200-48957200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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