Variant report

Variant rs4953838
Chromosome Location chr2:110857654-110857655
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:110852800-110858600 Genic enhancers A549 lung
2 chr2:110853600-110857800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr2:110853600-110858000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr2:110853600-110858000 Strong transcription Fetal Intestine Small intestine
5 chr2:110853600-110858000 Weak transcription NHLF lung
6 chr2:110854600-110860600 Enhancers HMEC breast
7 chr2:110855200-110858000 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr2:110855200-110858200 Weak transcription Fetal Lung lung
9 chr2:110855600-110860600 Enhancers Right Ventricle heart
10 chr2:110855800-110858200 Weak transcription Stomach Mucosa stomach
11 chr2:110855800-110858600 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:110856200-110862400 Enhancers Left Ventricle heart
13 chr2:110856400-110858200 Strong transcription Fetal Intestine Large intestine
14 chr2:110856400-110860400 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr2:110856400-110860600 Enhancers Esophagus oesophagus
16 chr2:110856400-110861600 Enhancers Fetal Muscle Leg muscle
17 chr2:110856400-110861600 Enhancers HUVEC blood vessel
18 chr2:110856400-110863200 Enhancers Lung lung
19 chr2:110856600-110857800 Genic enhancers Duodenum Mucosa Duodenum
20 chr2:110856600-110857800 Enhancers Spleen Spleen
21 chr2:110856600-110858600 Enhancers Rectal Mucosa Donor 31 rectum
22 chr2:110856600-110859600 Enhancers Fetal Heart heart
23 chr2:110856600-110860400 Enhancers Skeletal Muscle Female skeletal muscle
24 chr2:110856600-110861400 Enhancers Adipose Nuclei Adipose
25 chr2:110856600-110865800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:110856800-110857800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:110856800-110858600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr2:110856800-110858600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr2:110856800-110858600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr2:110856800-110858600 Enhancers Hela-S3 cervix
31 chr2:110857200-110858600 Enhancers Colonic Mucosa Colon
32 chr2:110857200-110863200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:110857400-110858400 Weak transcription Right Atrium heart
34 chr2:110857400-110858600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:110857400-110859200 Enhancers NHDF-Ad bronchial
36 chr2:110857400-110861200 Enhancers Fetal Muscle Trunk muscle
37 chr2:110857400-110863400 Weak transcription Aorta Aorta
38 chr2:110857400-110864000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr2:110857600-110858400 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr2:110857600-110858800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr2:110857600-110858800 Enhancers Rectal Mucosa Donor 29 rectum
42 chr2:110857600-110859400 Enhancers NHEK skin
43 chr2:110857600-110859800 Enhancers Primary hematopoietic stem cells short term culture blood

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