The 2.0 version of rSNPBase

Variant report

Variant rs4987284
Chromosome Location chr1:169678333-169678334
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169671200-169679400 Transcr. at gene 5' and 3' Dnd41 blood
2 chr1:169673200-169678400 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
3 chr1:169676000-169679400 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
4 chr1:169676400-169680600 Active TSS Primary T killer naive cells fromperipheralblood blood
5 chr1:169676600-169681400 Active TSS Primary T killer memory cells from peripheral blood blood
6 chr1:169677200-169679400 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
7 chr1:169677400-169680600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
8 chr1:169677400-169681000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:169677600-169678800 Active TSS Primary T regulatory cells fromperipheralblood blood
10 chr1:169677600-169680200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
11 chr1:169677600-169681000 Active TSS Primary T helper 17 cells PMA-I stimulated --
12 chr1:169677800-169678400 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr1:169677800-169678800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:169677800-169678800 Active TSS GM12878-XiMat blood
15 chr1:169677800-169680600 Active TSS Primary T cells fromperipheralblood blood
16 chr1:169677800-169680600 Weak transcription Rectal Smooth Muscle rectum
17 chr1:169678000-169678400 Active TSS Primary hematopoietic stem cells blood
18 chr1:169678000-169678400 Active TSS Primary T helper cells fromperipheralblood blood
19 chr1:169678000-169678600 Active TSS Primary T helper cells PMA-I stimulated --
20 chr1:169678000-169678600 Active TSS Primary Natural Killer cells fromperipheralblood blood
21 chr1:169678000-169678800 Weak transcription Fetal Thymus thymus
22 chr1:169678000-169678800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr1:169678000-169678800 Weak transcription Thymus Thymus
24 chr1:169678000-169680000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:169678000-169681000 Active TSS Primary T helper naive cells from peripheral blood blood
26 chr1:169678000-169681000 Active TSS Primary T helper naive cells fromperipheralblood blood
27 chr1:169678200-169678400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:169678200-169678400 Active TSS Monocytes-CD14+_RO01746 blood
29 chr1:169678200-169678600 Active TSS Primary mononuclear cells fromperipheralblood Blood
30 chr1:169678200-169678800 Active TSS Primary monocytes fromperipheralblood blood
31 chr1:169678200-169681000 Active TSS Primary T cells from cord blood blood

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Last update: Aug 31, 2015