Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10760792	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10819904	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1431473	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1431474	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2244542	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2567302	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2567306	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2567307	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2771063	0.85[AMR][1000 genomes]
rs2771070	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2915417	0.90[AMR][1000 genomes]
rs2987749	0.82[AMR][1000 genomes]
rs3097687	0.88[AMR][1000 genomes]
rs3097688	0.86[AMR][1000 genomes]
rs3118942	0.87[AMR][1000 genomes]
rs3118943	0.80[AMR][1000 genomes]
rs367599	0.86[AMR][1000 genomes]
rs417146	0.86[AMR][1000 genomes]
rs430336	0.85[AMR][1000 genomes]
rs438403	0.85[AMR][1000 genomes]
rs4742807	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4743444	0.82[ASN][1000 genomes]
rs480533	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs646418	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7030378	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs814061	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831671	chr9:103858107-104020816	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv982331	chr9:103885456-103890947	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:103877600-103901600	Weak transcription	Fetal Brain Male	brain
2	chr9:103877800-103887600	Weak transcription	Brain Substantia Nigra	brain
3	chr9:103882000-103887800	Weak transcription	Brain Hippocampus Middle	brain
4	chr9:103885000-103887000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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