Variant report

Variant	rs5030491
Chromosome Location	chr11:36532932-36532933
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs16929326	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36532000-36533000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr11:36532400-36533600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr11:36532600-36533000	Enhancers	Pancreas	Pancrea
4	chr11:36532600-36533000	Enhancers	Dnd41	blood
5	chr11:36532600-36533400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr11:36532600-36533600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr11:36532600-36533600	Weak transcription	Fetal Heart	heart
8	chr11:36532600-36533600	Weak transcription	NH-A	brain
9	chr11:36532600-36533600	Weak transcription	Osteobl	bone
10	chr11:36532600-36534000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr11:36532600-36534200	Enhancers	HepG2	liver
12	chr11:36532600-36534200	Enhancers	HUVEC	blood vessel
13	chr11:36532600-36534600	Enhancers	Fetal Intestine Large	intestine
14	chr11:36532600-36534800	Enhancers	Fetal Intestine Small	intestine
15	chr11:36532600-36535400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr11:36532800-36533400	Enhancers	HMEC	breast
17	chr11:36532800-36533600	Weak transcription	K562	blood
18	chr11:36532800-36534000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr11:36532800-36534000	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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