Variant report

Variant rs507177
Chromosome Location chr1:149672809-149672810
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149671200-149674200 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
2 chr1:149671600-149673400 Bivalent/Poised TSS Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:149671600-149673400 Bivalent/Poised TSS Fetal Brain Female brain
4 chr1:149671600-149673800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr1:149671800-149673000 Flanking Bivalent TSS/Enh Primary monocytes fromperipheralblood blood
6 chr1:149671800-149673000 Bivalent Enhancer Fetal Muscle Trunk muscle
7 chr1:149671800-149673200 Bivalent Enhancer Liver Liver
8 chr1:149671800-149673200 Bivalent/Poised TSS Stomach Smooth Muscle stomach
9 chr1:149671800-149673400 Flanking Bivalent TSS/Enh Primary neutrophils fromperipheralblood blood
10 chr1:149671800-149673400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
11 chr1:149671800-149673400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:149671800-149673400 Bivalent Enhancer Left Ventricle heart
13 chr1:149671800-149673600 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:149671800-149673800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
15 chr1:149671800-149673800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
16 chr1:149672000-149673000 Active TSS Primary T helper naive cells fromperipheralblood blood
17 chr1:149672000-149673000 Bivalent/Poised TSS Rectal Smooth Muscle rectum
18 chr1:149672000-149673200 Active TSS Primary hematopoietic stem cells blood
19 chr1:149672000-149673200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
20 chr1:149672000-149673200 Active TSS Primary T helper cells fromperipheralblood blood
21 chr1:149672000-149673200 Active TSS Primary T regulatory cells fromperipheralblood blood
22 chr1:149672000-149673200 Active TSS Primary mononuclear cells fromperipheralblood Blood
23 chr1:149672000-149673400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:149672000-149673800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
25 chr1:149672200-149673000 Active TSS Primary B cells from cord blood blood
26 chr1:149672200-149673000 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:149672200-149673000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:149672200-149673000 Active TSS HMEC breast
29 chr1:149672200-149673200 Bivalent/Poised TSS iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:149672200-149673200 Flanking Active TSS Adipose Nuclei Adipose
31 chr1:149672200-149673200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
32 chr1:149672200-149673200 Enhancers Right Ventricle heart
33 chr1:149672200-149673400 Bivalent/Poised TSS Primary T cells from cord blood blood
34 chr1:149672200-149673400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:149672200-149673400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
36 chr1:149672400-149673000 Bivalent/Poised TSS Primary B cells from peripheral blood blood
37 chr1:149672400-149673000 Bivalent/Poised TSS Fetal Stomach stomach
38 chr1:149672400-149673000 Active TSS Rectal Mucosa Donor 29 rectum
39 chr1:149672400-149673200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:149672400-149673200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:149672400-149673200 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:149672400-149673200 Active TSS Duodenum Mucosa Duodenum
43 chr1:149672400-149673200 Enhancers Gastric stomach
44 chr1:149672400-149673400 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:149672400-149673400 Bivalent/Poised TSS NHEK skin
46 chr1:149672400-149673800 Active TSS H9 Cell Line embryonic stem cell
47 chr1:149672600-149673000 Bivalent/Poised TSS Cortex derived primary cultured neurospheres brain
48 chr1:149672600-149673000 Active TSS A549 lung
49 chr1:149672600-149673200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:149672600-149673200 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung

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