Variant report

Variant rs510549
Chromosome Location chr3:111700305-111700306
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111698200-111700400 Flanking Active TSS Primary B cells from cord blood blood
2 chr3:111698400-111710200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:111698600-111701200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr3:111698600-111717400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr3:111698600-111717400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:111698600-111717400 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:111698800-111700600 Weak transcription Rectal Smooth Muscle rectum
8 chr3:111698800-111700800 Enhancers Brain Hippocampus Middle brain
9 chr3:111698800-111700800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr3:111698800-111701000 Enhancers Primary B cells from peripheral blood blood
11 chr3:111698800-111701000 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr3:111698800-111701000 Enhancers Adipose Nuclei Adipose
13 chr3:111698800-111701200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr3:111698800-111701600 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr3:111698800-111701600 Enhancers Primary T killer memory cells from peripheral blood blood
16 chr3:111698800-111701600 Enhancers Brain Substantia Nigra brain
17 chr3:111698800-111701800 Weak transcription HSMM muscle
18 chr3:111698800-111705200 Weak transcription Fetal Intestine Large intestine
19 chr3:111698800-111705800 Weak transcription H1 Cell Line embryonic stem cell
20 chr3:111698800-111705800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr3:111698800-111706200 Weak transcription H9 Cell Line embryonic stem cell
22 chr3:111698800-111717400 Weak transcription Colonic Mucosa Colon
23 chr3:111698800-111717400 Weak transcription Placenta Placenta
24 chr3:111698800-111717600 Weak transcription HSMMtube muscle
25 chr3:111699000-111700800 Enhancers Cortex derived primary cultured neurospheres brain
26 chr3:111699000-111700800 Enhancers Fetal Heart heart
27 chr3:111699000-111701000 Enhancers Fetal Brain Male brain
28 chr3:111699000-111701200 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr3:111699000-111701200 Enhancers Primary monocytes fromperipheralblood blood
30 chr3:111699000-111702400 Enhancers Primary T helper cells fromperipheralblood blood
31 chr3:111699000-111702400 Enhancers Liver Liver
32 chr3:111699000-111703600 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr3:111699000-111717400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr3:111699200-111700400 Enhancers Rectal Mucosa Donor 29 rectum
35 chr3:111699200-111700800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr3:111699200-111700800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr3:111699200-111700800 Enhancers Primary hematopoietic stem cells blood
38 chr3:111699200-111700800 Enhancers Rectal Mucosa Donor 31 rectum
39 chr3:111699200-111700800 Enhancers NHEK skin
40 chr3:111699200-111701000 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr3:111699200-111701200 Enhancers Duodenum Smooth Muscle Duodenum
42 chr3:111699200-111701200 Enhancers Fetal Lung lung
43 chr3:111699200-111701600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr3:111699200-111704600 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr3:111699200-111705200 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr3:111699200-111705800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr3:111699200-111705800 Weak transcription HMEC breast
48 chr3:111699200-111717400 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr3:111699400-111700800 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr3:111699400-111701000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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