Variant report

Variant	rs516376
Chromosome Location	chr11:94369712-94369713
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs542116	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56371912	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs607139	0.87[AFR][1000 genomes]
rs695068	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1978587	chr11:94369711-94369713	Weak transcription Enhancers Strong transcription	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94363800-94371800	Weak transcription	Primary hematopoietic stem cells	blood
2	chr11:94368000-94374200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr11:94368200-94370000	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr11:94368400-94371600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr11:94368400-94374000	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr11:94368400-94374000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr11:94368600-94371200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr11:94368600-94371200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr11:94368600-94371800	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr11:94369200-94370000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr11:94369200-94371800	Enhancers	K562	blood
12	chr11:94369400-94370000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr11:94369600-94370000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr11:94369600-94370000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr11:94369600-94370000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr11:94369600-94370600	Enhancers	Monocytes-CD14+_RO01746	blood
17	chr11:94369600-94371600	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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