The 2.0 version of rSNPBase

Variant report

Variant rs527325534
Chromosome Location chr12:103889356-103889357
allele -/C
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:103887400-103889400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:103888200-103889600 Active TSS Thymus Thymus
3 chr12:103888400-103889800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
4 chr12:103888400-103890000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
5 chr12:103888400-103890200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
6 chr12:103888400-103890200 Active TSS H9 Cell Line embryonic stem cell
7 chr12:103888400-103890200 Active TSS Brain Angular Gyrus brain
8 chr12:103888600-103889400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
9 chr12:103888600-103889400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr12:103888600-103889600 Active TSS HUES48 Cell Line embryonic stem cell
11 chr12:103888600-103889600 Bivalent Enhancer Fetal Muscle Leg muscle
12 chr12:103888600-103890000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
13 chr12:103888600-103890200 Active TSS iPS-15b Cell Line embryonic stem cell
14 chr12:103888800-103889400 Active TSS Right Atrium heart
15 chr12:103888800-103889600 Active TSS Primary T killer naive cells fromperipheralblood blood
16 chr12:103888800-103889600 Active TSS Primary mononuclear cells fromperipheralblood Blood
17 chr12:103888800-103889600 Active TSS Brain Substantia Nigra brain
18 chr12:103888800-103889800 Active TSS H1 Cell Line embryonic stem cell
19 chr12:103888800-103889800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr12:103888800-103889800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr12:103888800-103889800 Active TSS iPS-20b Cell Line embryonic stem cell
22 chr12:103888800-103889800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
23 chr12:103888800-103890000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
24 chr12:103888800-103890000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr12:103888800-103890000 Active TSS iPS-18 Cell Line embryonic stem cell
26 chr12:103888800-103890000 Active TSS Brain Inferior Temporal Lobe brain
27 chr12:103888800-103890000 Enhancers Pancreas Pancrea
28 chr12:103889000-103889400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
29 chr12:103889000-103889400 Active TSS Brain Germinal Matrix brain
30 chr12:103889000-103889400 Bivalent/Poised TSS Psoas Muscle Psoas
31 chr12:103889000-103889600 Active TSS ES-WA7 Cell Line embryonic stem cell
32 chr12:103889000-103889600 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:103889000-103889600 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr12:103889000-103889600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr12:103889000-103889600 Active TSS Primary T helper cells PMA-I stimulated --
36 chr12:103889000-103889600 Active TSS Primary T helper 17 cells PMA-I stimulated --
37 chr12:103889000-103889600 Active TSS Primary T helper cells fromperipheralblood blood
38 chr12:103889000-103889600 Bivalent/Poised TSS Primary Natural Killer cells fromperipheralblood blood
39 chr12:103889000-103889600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr12:103889000-103889600 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
41 chr12:103889000-103889600 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
42 chr12:103889000-103889600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
43 chr12:103889000-103889600 Bivalent/Poised TSS Fetal Stomach stomach
44 chr12:103889000-103889600 Active TSS Fetal Thymus thymus
45 chr12:103889000-103889600 Active TSS Right Ventricle heart
46 chr12:103889000-103889600 Active TSS Dnd41 blood
47 chr12:103889000-103889600 Active TSS GM12878-XiMat blood
48 chr12:103889000-103889800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr12:103889000-103889800 Active TSS Primary T helper naive cells fromperipheralblood blood
50 chr12:103889000-103889800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015