Variant report

Variant	rs527350291
Chromosome Location	chr8:19673630-19673631
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890625	chr8:19368697-19799641	Strong transcription Weak transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv610759	chr8:19561997-20068842	Enhancers Strong transcription Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
3	esv3425950	chr8:19673522-19676520	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:19670600-19673800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:19670600-19673800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:19670600-19674000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:19671400-19674000	Weak transcription	Primary B cells from peripheral blood	blood
5	chr8:19672400-19674200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr8:19673600-19673800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr8:19673600-19673800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:19673600-19673800	Enhancers	Brain Inferior Temporal Lobe	brain
9	chr8:19673600-19673800	Enhancers	Dnd41	blood
10	chr8:19673600-19673800	Enhancers	Hela-S3	cervix
11	chr8:19673600-19673800	Enhancers	Osteobl	bone
12	chr8:19673600-19674000	Enhancers	Primary T helper cells fromperipheralblood	blood
13	chr8:19673600-19674000	Enhancers	Brain Hippocampus Middle	brain
14	chr8:19673600-19674000	Flanking Active TSS	A549	lung
15	chr8:19673600-19674000	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr8:19673600-19674400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
17	chr8:19673600-19675800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr8:19673600-19675800	Active TSS	Rectal Mucosa Donor 29	rectum
19	chr8:19673600-19676000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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